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    Peptide chain release factor 2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842089, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Peptide chain release factor 2
    Primary source
    TAIR:AT1G56350
    Locus tag
    AT1G56350
    See related
    Araport:AT1G56350
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F13N6.6; F13N6_6
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    7
    Sequence:
    Chromosome: 1; NC_003070.9 (21094743..21098047)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene calreticulin 1a Neighboring gene Pseudouridine synthase family protein Neighboring gene purple acid phosphatase 6 Neighboring gene Mitochondrial transcription termination factor family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_104515.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables translation release factor activity, codon specific IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in translational termination IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Peptide chain release factor 2
    NP_176032.2
    • Peptide chain release factor 2; FUNCTIONS IN: translation release factor activity, codon specific, translation release factor activity; INVOLVED IN: translational termination; LOCATED IN: cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Class I peptide chain release factor (InterPro:IPR000352), Peptide chain release factor 2 (InterPro:IPR004374), Peptide chain release factor (InterPro:IPR005139); BEST Arabidopsis thaliana protein match is: high chlorophyll fluorescent 109 (TAIR:AT5G36170.2); Has 16865 Blast hits to 16865 proteins in 2794 species: Archae - 0; Bacteria - 10325; Metazoa - 292; Fungi - 236; Plants - 212; Viruses - 15; Other Eukaryotes - 5785 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      21094743..21098047
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_104515.4 → NP_176032.2  Peptide chain release factor 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176032.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4I532, Q9C7K9, Q9C7X9
      UniProtKB/TrEMBL
      A0A178WD49, A0A5S9WMF2, A0A654EP31
      Conserved Domains (1) summary
      PRK00578
      Location:114 → 471
      prfB; peptide chain release factor 2; Validated
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4I532.1

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