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    HSP40/DnaJ peptide-binding protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841019, updated on 18-Sep-2024

    Summary

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    Official Full Name
    HSP40/DnaJ peptide-binding protein
    Primary source
    TAIR:AT1G44160
    Locus tag
    AT1G44160
    See related
    Araport:AT1G44160
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T7O23.16; T7O23_16
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (16794820..16796450)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene miscRNA Neighboring gene aldehyde dehydrogenase 3H1 Neighboring gene Peptidase M20/M25/M40 family protein Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_103540.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables unfolded protein binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein folding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    HSP40/DnaJ peptide-binding protein
    NP_175080.2
    • HSP40/DnaJ peptide-binding protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: HSP40/DnaJ peptide-binding protein (TAIR:AT1G11040.1); Has 12682 Blast hits to 12678 proteins in 3092 species: Archae - 108; Bacteria - 7085; Metazoa - 1071; Fungi - 625; Plants - 733; Viruses - 2; Other Eukaryotes - 3058 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      16794820..16796450
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_103540.5 → NP_175080.2  HSP40/DnaJ peptide-binding protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175080.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2DYY4, Q0WRX5
      Conserved Domains (2) summary
      cd10747
      Location:178 → 341
      DnaJ_C; C-terminal substrate binding domain of DnaJ and HSP40
      COG0484
      Location:221 → 357
      DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
    Nucleotide Protein
    Heading Accession and Version

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