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    Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842604, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein
    Primary source
    TAIR:AT1G63010
    Locus tag
    AT1G63010
    See related
    Araport:AT1G63010
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F16P17.18; F16P17_18
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    14
    Sequence:
    Chromosome: 1; NC_003070.9 (23347561..23352831, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene nucleotide-rhamnose synthase/epimerase-reductase Neighboring gene ncRNA Neighboring gene nuclear RNA polymerase D1A Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Vacuolar Phosphate Transporter 1 (VPT1) Affects Arsenate Tolerance by Regulating Phosphate Homeostasis in Arabidopsis. Luan M, et al. Plant Cell Physiol, 2018 Jul 1. PMID 29420798
    2. A vacuolar phosphate transporter essential for phosphate homeostasis in Arabidopsis. Liu J, et al. Proc Natl Acad Sci U S A, 2015 Nov 24. PMID 26554016, Free PMC Article
    3. Vacuolar Phosphate Transporters Contribute to Systemic Phosphate Homeostasis Vital for Reproductive Development in Arabidopsis. Luan M, et al. Plant Physiol, 2019 Feb. PMID 30552198, Free PMC Article
    4. Identification of plant vacuolar transporters mediating phosphate storage. Liu TY, et al. Nat Commun, 2016 Mar 31. PMID 27029856, Free PMC Article
    5. Mapping the Arabidopsis organelle proteome. Dunkley TP, et al. Proc Natl Acad Sci U S A, 2006 Apr 25. PMID 16618929, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. VPT1 (AT1G63010) contributes to cytosol-to-vacuole phosphate partitioning and reproductive development.
      Title: Vacuolar Phosphate Transporters Contribute to Systemic Phosphate Homeostasis Vital for Reproductive Development in Arabidopsis.
    2. VPT1 role in the arsenate tolerance and phosphate homeostasis.
      Title: Vacuolar Phosphate Transporter 1 (VPT1) Affects Arsenate Tolerance by Regulating Phosphate Homeostasis in Arabidopsis.
    3. VPT1 is a transporter responsible for vacuolar phosphate (Pi) storage and is essential for Pi adaptation in Arabidopsis.[VPT1]
      Title: A vacuolar phosphate transporter essential for phosphate homeostasis in Arabidopsis.
    Submit: New GeneRIF Correction

    General gene information

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    NM_001084293.1
    NM_001084294.2
    NM_001198368.1
    NM_001334059.1
    NM_001334060.1
    NM_104979.4
    NM_202344.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables phosphate transmembrane transporter activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables phosphate transmembrane transporter activity IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within phosphate ion homeostasis IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within phosphate ion homeostasis IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within phosphate ion transport IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within transmembrane phosphate ion transport from cytosol to vacuole IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within transmembrane phosphate ion transport from cytosol to vacuole IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus HDA PubMed 
    located_in nucleus HDA PubMed 
    located_in plant-type vacuole HDA PubMed 
    located_in plant-type vacuole membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  
    located_in vacuolar membrane HDA PubMed 
    located_in vacuole HDA PubMed 

    General protein information

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    Preferred Names
    Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein
    NP_001077762.1
    • Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein; INVOLVED IN: transmembrane transport; LOCATED IN: vacuolar membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein (TAIR:AT4G22990.2); Has 2617 Blast hits to 2616 proteins in 868 species: Archae - 45; Bacteria - 1644; Metazoa - 146; Fungi - 352; Plants - 233; Viruses - 1; Other Eukaryotes - 196 (source: NCBI BLink).
    NP_001077763.1
    • Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein; INVOLVED IN: transmembrane transport; LOCATED IN: vacuolar membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein (TAIR:AT4G22990.2); Has 2617 Blast hits to 2616 proteins in 868 species: Archae - 45; Bacteria - 1644; Metazoa - 146; Fungi - 352; Plants - 233; Viruses - 1; Other Eukaryotes - 196 (source: NCBI BLink).
    NP_001185297.1
    • Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein; INVOLVED IN: transmembrane transport; LOCATED IN: vacuolar membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein (TAIR:AT4G22990.2).
    NP_564807.2
    • Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein; INVOLVED IN: transmembrane transport; LOCATED IN: vacuolar membrane, plant-type vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein (TAIR:AT4G22990.2); Has 2617 Blast hits to 2616 proteins in 868 species: Archae - 45; Bacteria - 1644; Metazoa - 146; Fungi - 352; Plants - 233; Viruses - 1; Other Eukaryotes - 196 (source: NCBI BLink).
    NP_974073.2
    • Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein; INVOLVED IN: transmembrane transport; LOCATED IN: vacuolar membrane, plant-type vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein (TAIR:AT4G22990.2); Has 2641 Blast hits to 2640 proteins in 874 species: Archae - 45; Bacteria - 1658; Metazoa - 145; Fungi - 361; Plants - 235; Viruses - 1; Other Eukaryotes - 196 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      23347561..23352831 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001198368.1 → NP_001185297.1  Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001185297.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WP20, A0A654EW84, F4I0G7
      Conserved Domains (4) summary
      cd06174
      Location:266 → 440
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
      cd14479
      Location:2 → 150
      SPX-MFS_plant; SPX domain of proteins found in plants and stramenopiles; most have a C-terminal MFS domain
      pfam03105
      Location:4 → 154
      SPX; SPX domain
      pfam07690
      Location:266 → 651
      MFS_1; Major Facilitator Superfamily

    2. NM_001084294.2 → NP_001077763.1  Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001077763.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WP20, A0A654EW84, F4I0G4
      Conserved Domains (2) summary
      cd14479
      Location:2 → 141
      SPX-MFS_plant; SPX domain of proteins found in plants and stramenopiles; most have a C-terminal MFS domain
      cl28910
      Location:249 → 657
      MFS; Major Facilitator Superfamily

    3. NM_202344.2 → NP_974073.2  Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974073.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q2V4F9, Q94C80, Q9CAP0, Q9LQ03
      UniProtKB/TrEMBL
      A0A5S9WP20, A0A654EW84
      Conserved Domains (4) summary
      cd06174
      Location:257 → 431
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
      cd14479
      Location:2 → 141
      SPX-MFS_plant; SPX domain of proteins found in plants and stramenopiles; most have a C-terminal MFS domain
      pfam03105
      Location:4 → 145
      SPX; SPX domain
      pfam07690
      Location:257 → 640
      MFS_1; Major Facilitator Superfamily

    4. NM_104979.4 → NP_564807.2  Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564807.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WP20, A0A654EW84, F4I0G4
      Conserved Domains (2) summary
      cd14479
      Location:2 → 141
      SPX-MFS_plant; SPX domain of proteins found in plants and stramenopiles; most have a C-terminal MFS domain
      cl28910
      Location:249 → 657
      MFS; Major Facilitator Superfamily

    5. NM_001084293.1 → NP_001077762.1  Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001077762.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WP20, A0A654EW84, F4I0G4
      Conserved Domains (2) summary
      cd14479
      Location:2 → 141
      SPX-MFS_plant; SPX domain of proteins found in plants and stramenopiles; most have a C-terminal MFS domain
      cl28910
      Location:249 → 657
      MFS; Major Facilitator Superfamily

    6. NM_001334060.1 → NP_001322579.1  Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WP20, A0A654EW84, F4I0G4
      Conserved Domains (2) summary
      cd14479
      Location:2 → 141
      SPX-MFS_plant; SPX domain of proteins found in plants and stramenopiles; most have a C-terminal MFS domain
      cl28910
      Location:249 → 657
      MFS; Major Facilitator Superfamily

    7. NM_001334059.1 → NP_001322578.1  Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WP20, A0A654EW84, F4I0G4
      Conserved Domains (2) summary
      cd14479
      Location:2 → 141
      SPX-MFS_plant; SPX domain of proteins found in plants and stramenopiles; most have a C-terminal MFS domain
      cl28910
      Location:249 → 657
      MFS; Major Facilitator Superfamily
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q2V4F9.1

    Gene LinkOut

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