U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    EML2 Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830567, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    EML2
    Official Full Name
    Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein
    Primary source
    TAIR:AT5G06780
    Locus tag
    AT5G06780
    See related
    Araport:AT5G06780
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtEML2; EMSY-like 2; MPH15.14; MPH15_14
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See EML2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    10
    Sequence:
    Chromosome: 5; NC_003076.8 (2093883..2097239, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Late Embryogenesis Abundant 4-5 Neighboring gene KH domain-containing protein / zinc finger (CCCH type) family protein Neighboring gene cotton fiber protein Neighboring gene myb-like HTH transcriptional regulator family protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Proteolytic Processing of Plant Proteins by Potyvirus NIa Proteases. Xiao H, et al. J Virol, 2022 Jan 26. PMID 34757836, Free PMC Article
    2. EMSY-like genes are required for full RPP7-mediated race-specific immunity and basal defense in Arabidopsis. Tsuchiya T, et al. Mol Plant Microbe Interact, 2011 Dec. PMID 21830950
    3. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    NM_001203313.1
    NM_120761.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in defense response to fungus IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in defense response to virus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in response to heat IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in vegetative to reproductive phase transition of meristem IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein
    NP_001190242.1
    • Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), ENT (InterPro:IPR005491); BEST Arabidopsis thaliana protein match is: Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein (TAIR:AT3G12140.2).
    NP_196296.1
    • Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein; CONTAINS InterPro DOMAIN/s: ENT (InterPro:IPR005491), Tudor-like, plant (InterPro:IPR014002); BEST Arabidopsis thaliana protein match is: Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein (TAIR:AT3G12140.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      2093883..2097239 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001203313.1 → NP_001190242.1  Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190242.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LE93, Q9FG29
      UniProtKB/TrEMBL
      A0A178UCC8, A0A5S9Y206, A0A7G2F641
      Conserved Domains (2) summary
      pfam03735
      Location:4 → 69
      ENT; ENT domain
      cd20404
      Location:129 → 179
      Tudor_Agenet_AtEML-like; Tudor-like Agenet domain found in Arabidopsis thaliana proteins EMSY-LIKE 1-4 (AtEML1-4) and similar proteins

    2. NM_120761.5 → NP_196296.1  Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196296.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2F641
      Conserved Domains (2) summary
      pfam03735
      Location:11 → 76
      ENT; ENT domain
      cd20404
      Location:136 → 186
      Tudor_Agenet_AtEML-like; Tudor-like Agenet domain found in Arabidopsis thaliana proteins EMSY-LIKE 1-4 (AtEML1-4) and similar proteins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FG29.2

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools