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    OVA4 Nucleotidylyl transferase superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817126, updated on 18-Sep-2024

    Summary

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    Official Symbol
    OVA4
    Official Full Name
    Nucleotidylyl transferase superfamily protein
    Primary source
    TAIR:AT2G25840
    Locus tag
    AT2G25840
    See related
    Araport:AT2G25840
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F17H15.13; F17H15_13; ovule abortion 4
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    Genomic context

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    See OVA4 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    13
    Sequence:
    Chromosome: 2; NC_003071.7 (11021692..11025451)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene tonoplast intrinsic protein 4;1 Neighboring gene Integrase-type DNA-binding superfamily protein Neighboring gene YebC-like protein Neighboring gene poly(A) polymerase 2 Neighboring gene haloacid dehalogenase-like hydrolase family protein Neighboring gene ataurora2 Neighboring gene Oleosin family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Dual targeting is the rule for organellar aminoacyl-tRNA synthetases in Arabidopsis thaliana. Duchêne AM, et al. Proc Natl Acad Sci U S A, 2005 Nov 8. PMID 16251277, Free PMC Article
    2. Requirement of aminoacyl-tRNA synthetases for gametogenesis and embryo development in Arabidopsis. Berg M, et al. Plant J, 2005 Dec. PMID 16297076
    3. Redox Conformation-Specific Protein-Protein Interactions of the 2-Cysteine Peroxiredoxin in Arabidopsis. Liebthal M, et al. Antioxidants (Basel), 2020 Jun 11. PMID 32545358, Free PMC Article
    4. AT_CHLORO, a comprehensive chloroplast proteome database with subplastidial localization and curated information on envelope proteins. Ferro M, et al. Mol Cell Proteomics, 2010 Jun. PMID 20061580, Free PMC Article
    5. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001336021.1
    NM_179739.4
    NM_201804.3
    NM_201805.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables tryptophan-tRNA ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within plant ovule development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in tryptophanyl-tRNA aminoacylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast HDA PubMed 
    located_in chloroplast IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in chloroplast stroma HDA PubMed 
    located_in mitochondrion IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in vacuole HDA PubMed 

    General protein information

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    Preferred Names
    Nucleotidylyl transferase superfamily protein
    NP_850070.1
    • ovule abortion 4 (OVA4); FUNCTIONS IN: nucleotide binding, aminoacyl-tRNA ligase activity, tryptophan-tRNA ligase activity, ATP binding; INVOLVED IN: N-terminal protein myristoylation, tRNA aminoacylation for protein translation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tryptophanyl-tRNA synthetase, class Ib (InterPro:IPR002306), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); Has 9074 Blast hits to 9053 proteins in 2715 species: Archae - 101; Bacteria - 5434; Metazoa - 147; Fungi - 137; Plants - 44; Viruses - 0; Other Eukaryotes - 3211 (source: NCBI BLink).
    NP_973533.1
    • ovule abortion 4 (OVA4); FUNCTIONS IN: tryptophan-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tryptophanyl-tRNA synthetase, class Ib (InterPro:IPR002306), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_973534.1
    • ovule abortion 4 (OVA4); FUNCTIONS IN: aminoacyl-tRNA ligase activity, tryptophan-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tryptophanyl-tRNA synthetase, class Ib (InterPro:IPR002306), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      11021692..11025451
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_179739.4 → NP_850070.1  Nucleotidylyl transferase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850070.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O82313, Q8RXE9
      UniProtKB/TrEMBL
      A0A654EXS2
      Conserved Domains (1) summary
      PLN02886
      Location:19 → 407
      PLN02886; aminoacyl-tRNA ligase

    2. NM_001336021.1 → NP_001323723.1  Nucleotidylyl transferase superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AY21, A0A654EXS2

    3. NM_201804.3 → NP_973533.1  Nucleotidylyl transferase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_973533.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VQC6, A0A654EXS2, F4ISP4
      Conserved Domains (2) summary
      PLN02886
      Location:19 → 411
      PLN02886; aminoacyl-tRNA ligase
      PRK00927
      Location:64 → 409
      PRK00927; tryptophanyl-tRNA synthetase; Reviewed

    4. NM_201805.1 → NP_973534.1  Nucleotidylyl transferase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_973534.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654EXS2, F4ISP6
      Conserved Domains (2) summary
      PLN02886
      Location:19 → 395
      PLN02886; aminoacyl-tRNA ligase
      PRK00927
      Location:64 → 393
      PRK00927; tryptophanyl-tRNA synthetase; Reviewed
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8RXE9.1

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