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    eukaryotic translation initiation factor 2B family protein / eIF-2B family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831786, updated on 18-Sep-2024

    Summary

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    Official Full Name
    eukaryotic translation initiation factor 2B family protein / eIF-2B family protein
    Primary source
    TAIR:AT5G01940
    Locus tag
    AT5G01940
    See related
    Araport:AT5G01940
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T20L15.210; T20L15_210
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    7
    Sequence:
    Chromosome: 5; NC_003076.8 (363213..364891, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene myelin transcription factor Neighboring gene Protein kinase superfamily protein Neighboring gene Glycosyl hydrolase superfamily protein Neighboring gene Leucine-rich repeat protein kinase family protein Neighboring gene RING/U-box superfamily protein Neighboring gene heat-inducible transcription repressor

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_120272.2

    General protein information

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    Preferred Names
    eukaryotic translation initiation factor 2B family protein / eIF-2B family protein
    NP_195814.1
    • eukaryotic translation initiation factor 2B family protein / eIF-2B family protein; FUNCTIONS IN: translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Translation initiation factor IF2/IF5, N-terminal (InterPro:IPR016189), Translation initiation factor IF2/IF5 (InterPro:IPR002735); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 2 beta subunit (TAIR:AT5G20920.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      363213..364891 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001342627.1 → NP_001331900.1  eukaryotic translation initiation factor 2B family protein / eIF-2B family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UNV7, A0A1P8BFE1, A0A384L4R3, A0A5S9Y0L5, A0A654FXL8
      Conserved Domains (1) summary
      smart00653
      Location:97 → 206
      eIF2B_5; domain present in translation initiation factor eIF2B and eIF5

    2. NM_001342628.1 → NP_001331901.1  eukaryotic translation initiation factor 2B family protein / eIF-2B family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BFD8, A0A5S9Y0L5, A0A654FXL8

    3. NM_120272.2 → NP_195814.1  eukaryotic translation initiation factor 2B family protein / eIF-2B family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195814.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9Y0L5, A0A654FXL8, Q9LZV2
      Conserved Domains (1) summary
      smart00653
      Location:97 → 202
      eIF2B_5; domain present in translation initiation factor eIF2B and eIF5
    Nucleotide Protein
    Heading Accession and Version

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