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    wall-associated receptor kinase carboxy-terminal protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820998, updated on 18-Sep-2024

    Summary

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    Official Full Name
    wall-associated receptor kinase carboxy-terminal protein
    Primary source
    TAIR:AT3G17350
    Locus tag
    AT3G17350
    See related
    Araport:AT3G17350
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    3
    Sequence:
    Chromosome: 3; NC_003074.8 (5934033..5935376)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ARM repeat superfamily protein Neighboring gene ncRNA Neighboring gene phragmoplast orienting kinesin 1 Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001338285.1
    NM_112613.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables polysaccharide binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    wall-associated receptor kinase carboxy-terminal protein
    NP_188361.2
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G50290.1); Has 203 Blast hits to 203 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 203; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      5934033..5935376
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112613.3 → NP_188361.2  wall-associated receptor kinase carboxy-terminal protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188361.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V7Z4, F4J551
      Conserved Domains (2) summary
      pfam13947
      Location:29 → 129
      GUB_WAK_bind; Wall-associated receptor kinase galacturonan-binding
      pfam14380
      Location:222 → 259
      WAK_assoc; Wall-associated receptor kinase C-terminal

    2. NM_001338285.1 → NP_001327265.1  wall-associated receptor kinase carboxy-terminal protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XD63, A0A654F820, Q9LUT6
      Conserved Domains (2) summary
      pfam13947
      Location:29 → 129
      GUB_WAK_bind; Wall-associated receptor kinase galacturonan-binding
      pfam14380
      Location:222 → 259
      WAK_assoc; Wall-associated receptor kinase C-terminal
    Nucleotide Protein
    Heading Accession and Version

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