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    TPR15 Heat shock protein DnaJ with tetratricopeptide repeat-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818750, updated on 18-Sep-2024

    Summary

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    Official Symbol
    TPR15
    Official Full Name
    Heat shock protein DnaJ with tetratricopeptide repeat-containing protein
    Primary source
    TAIR:AT2G41520
    Locus tag
    AT2G41520
    See related
    Araport:AT2G41520
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    DJC62; DNA J protein C62; T32G6.4; T32G6_4; tetratricopeptide repeat 15
    Summary
    Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones.
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    Genomic context

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    See TPR15 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    13
    Sequence:
    Chromosome: 2; NC_003071.7 (17317467..17323056)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene cytokinin oxidase/dehydrogenase 1 Neighboring gene S-formylglutathione hydrolase Neighboring gene 6-phosphogluconate dehydrogenase family protein Neighboring gene Rho termination factor

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The TPR- and J-domain-containing proteins DJC31 and DJC62 are involved in abiotic stress responses in Arabidopsis thaliana. Dittmer S, et al. J Cell Sci, 2021 Oct 1. PMID 34515300
    2. Evolution of chloroplast J proteins. Chiu CC, et al. PLoS One, 2013. PMID 23894646, Free PMC Article
    3. A proteomic strategy for global analysis of plant protein complexes. Aryal UK, et al. Plant Cell, 2014 Oct. PMID 25293756, Free PMC Article
    4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The TPR- and J-domain-containing proteins DJC31 and DJC62 are involved in abiotic stress responses in Arabidopsis thaliana.
      Title: The TPR- and J-domain-containing proteins DJC31 and DJC62 are involved in abiotic stress responses in Arabidopsis thaliana.
    Submit: New GeneRIF Correction

    General gene information

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    NM_001336923.1
    NM_180020.4
    NM_201930.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in cytosol HDA PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Heat shock protein DnaJ with tetratricopeptide repeat-containing protein
    NP_850351.1
    • Heat shock protein DnaJ with tetratricopeptide repeat; FUNCTIONS IN: binding, heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Heat shock protein DnaJ with tetratricopeptide repeat (TAIR:AT5G12430.1); Has 24543 Blast hits to 21405 proteins in 3009 species: Archae - 131; Bacteria - 8314; Metazoa - 5854; Fungi - 2610; Plants - 2808; Viruses - 9; Other Eukaryotes - 4817 (source: NCBI BLink).
    NP_973659.1
    • Heat shock protein DnaJ with tetratricopeptide repeat; FUNCTIONS IN: binding, heat shock protein binding; INVOLVED IN: protein folding; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 (InterPro:IPR001440), Tetratricopeptide-like helical (InterPro:IPR011990), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Tetratricopeptide repeat-containing (InterPro:IPR013026), Tetratricopeptide repeat (InterPro:IPR019734), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: Heat shock protein DnaJ with tetratricopeptide repeat (TAIR:AT5G12430.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      17317467..17323056
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_180020.4 → NP_850351.1  Heat shock protein DnaJ with tetratricopeptide repeat-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850351.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VZX6, F4IKX0, Q8W4F7
      Conserved Domains (3) summary
      TIGR00990
      Location:809 → 927
      3a0801s09; mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70)
      sd00006
      Location:553 → 581
      TPR; TPR repeat [structural motif]
      pfam00226
      Location:978 → 1059
      DnaJ; DnaJ domain

    2. NM_001336923.1 → NP_001324857.1  Heat shock protein DnaJ with tetratricopeptide repeat-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B1G1, Q8W4F7

    3. NM_201930.1 → NP_973659.1  Heat shock protein DnaJ with tetratricopeptide repeat-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_973659.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4IKX1, Q8W4F7
      Conserved Domains (5) summary
      COG0457
      Location:610 → 902
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:553 → 581
      TPR; TPR repeat [structural motif]
      pfam00226
      Location:947 → 1028
      DnaJ; DnaJ domain
      pfam00515
      Location:597 → 630
      TPR_1; Tetratricopeptide repeat
      pfam13414
      Location:554 → 628
      TPR_11; TPR repeat
    Nucleotide Protein
    Heading Accession and Version

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