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    RLP2 receptor like protein 2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838295, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RLP2
    Official Full Name
    receptor like protein 2
    Primary source
    TAIR:AT1G17240
    Locus tag
    AT1G17240
    See related
    Araport:AT1G17240
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtRLP2; F20D23.6; F20D23_6; receptor like protein 2
    Summary
    Encodes a CLAVATA2 (CLV2)-related gene. Complements the clv2 mutant when expressed under the control of the CLV2 promoter.
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    Genomic context

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    See RLP2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_003070.9 (5896385..5898931, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Leucine-rich receptor-like protein kinase family protein Neighboring gene ROTUNDIFOLIA like 11 Neighboring gene ncRNA Neighboring gene receptor like protein 3 Neighboring gene autoinhibited H[+]-ATPase isoform 10

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Functional analyses of the CLAVATA2-like proteins and their domains that contribute to CLAVATA2 specificity. Wang G, et al. Plant Physiol, 2010 Jan. PMID 19897604, Free PMC Article
    2. The leucine-rich repeat as a protein recognition motif. Kobe B, et al. Curr Opin Struct Biol, 2001 Dec. PMID 11751054
    3. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    NM_101585.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in meristem maintenance IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within signal transduction IC
    Inferred by Curator
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    receptor like protein 2
    NP_173167.1
    • receptor like protein 2 (RLP2); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT1G72300.1); Has 90767 Blast hits to 27052 proteins in 1087 species: Archae - 40; Bacteria - 7835; Metazoa - 18686; Fungi - 1120; Plants - 55519; Viruses - 2; Other Eukaryotes - 7565 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      5896385..5898931 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001332285.1 → NP_001320953.1  receptor like protein 2 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W7V5, A0A1P8APD8, A0A654ECK6
      Conserved Domains (3) summary
      PLN00113
      Location:36 → 702
      PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
      sd00031
      Location:655 → 666
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:121 → 145
      LRR_RI; leucine-rich repeat [structural motif]

    2. NM_101585.3 → NP_173167.1  receptor like protein 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173167.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SHI3
      UniProtKB/TrEMBL
      A0A178W7V5
      Conserved Domains (5) summary
      cd00116
      Location:294 → 427
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00031
      Location:650 → 661
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:116 → 140
      LRR_RI; leucine-rich repeat [structural motif]
      pfam08263
      Location:47 → 85
      LRRNT_2; Leucine rich repeat N-terminal domain
      pfam13855
      Location:115 → 181
      LRR_8; Leucine rich repeat
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SHI3.1

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