GSL04 glucan synthase-like 4 [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Symbol: GSL04
Official Full Name: glucan synthase-like 4
Primary source: TAIR:AT3G14570
Locus tag: AT3G14570
See related: Araport:AT3G14570
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: ATGSL04; atgsl4; glucan synthase-like 4; gsl04; GSL4
Summary: encodes a protein similar to callose synthase
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Genomic context

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See GSL04 in Genome Data Viewer

Location:: chromosome: 3

Exon count:: 41

Sequence:: Chromosome: 3; NC_003074.8 (4892410..4902880)

Chromosome 3 - NC_003074.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Regulating callose accumulation at plasmodesmal channels is a common strategy to alter plasmodesmal permeability under both pathogen infection and mechanical wounding stress. The authors identified Arabidopsis callose synthase 1 (CalS1) and CalS8 as key genes involved in this process, and have integrated these new players into both known and novel signalling pathways that control responses to biotic and abiotic stress.
Title: Arabidopsis callose synthases CalS1/8 regulate plasmodesmal permeability during stress.

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Pathways from PubChem

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General gene information

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NM_001202964.2

Supported by ESTs:

NM_001338124.1

Supported by ESTs:

NM_112317.3

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables 1,3-beta-D-glucan synthase activity	IEA Inferred from Electronic Annotation more info
enables 1,3-beta-D-glucan synthase activity	ISS Inferred from Sequence or Structural Similarity more info
enables glycosyltransferase activity	ISS Inferred from Sequence or Structural Similarity more info

Process	Evidence Code	Pubs
involved_in (1->3)-beta-D-glucan biosynthetic process	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
part_of 1,3-beta-D-glucan synthase complex	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: glucan synthase-like 4

NP_001189893.1

glucan synthase-like 4 (GSL04); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: 1,3-beta-glucan biosynthetic process; LOCATED IN: 1,3-beta-glucan synthase complex, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 12 (TAIR:AT5G13000.1).

NP_188075.2

glucan synthase-like 4 (GSL04); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: 1,3-beta-glucan biosynthetic process; LOCATED IN: 1,3-beta-glucan synthase complex, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440); BEST Arabidopsis thaliana protein match is: glucan synthase-like 12 (TAIR:AT5G13000.1); Has 1273 Blast hits to 902 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 714; Plants - 486; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003074.8 Reference assembly

Range

4892410..4902880

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_112317.3 → NP_188075.2 glucan synthase-like 4 [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_188075.2

Status: REVIEWED

UniProtKB/Swiss-Prot

Q9LUD7

UniProtKB/TrEMBL

A0A178VC58

Conserved Domains (3) summary

pfam02364
Location:1107 → 1835

Glucan_synthase; 1,3-beta-glucan synthase component

pfam04652
Location:69 → 117

Vta1; Vta1 like

pfam14288
Location:339 → 451

FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1
NM_001338124.1 → NP_001326811.1 glucan synthase-like 4 [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A178VC58, A0A1I9LQE8
NM_001202964.2 → NP_001189893.1 glucan synthase-like 4 [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_001189893.1

Status: REVIEWED

UniProtKB/TrEMBL

A0A178VC58, F4IW73

Conserved Domains (3) summary

pfam02364
Location:1081 → 1809

Glucan_synthase; 1,3-beta-glucan synthase component

pfam04652
Location:69 → 117

Vta1; Vta1 like

pfam14288
Location:339 → 451

FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1