cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Full Name: cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein
Primary source: TAIR:AT4G30820
Locus tag: AT4G30820
See related: Araport:AT4G30820
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: F6I18.270; F6I18_270
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Genomic context

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See in Genome Data Viewer

Location:: chromosome: 4

Exon count:: 6

Sequence:: Chromosome: 4; NC_003075.7 (15006485..15008650)

Chromosome 4 - NC_003075.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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NM_001085003.2

Supported by ESTs:

NM_001342020.1

Supported by ESTs:

NM_001342021.1

Supported by ESTs:

NM_001342022.1

Supported by ESTs:

NM_001342023.1

Supported by ESTs:

NM_001342024.1

Supported by ESTs:

NM_001342025.1

Supported by ESTs:

NM_001342026.1

Supported by ESTs:

NM_001342027.1

Supported by ESTs:

NM_001342028.1

Supported by ESTs:

NM_001342029.1

Supported by ESTs:

NM_001342030.1

Supported by ESTs:

NM_001342031.1

Supported by ESTs:

NM_001342032.1

Supported by ESTs:

NM_001342033.1

Supported by ESTs:

NM_001342034.1

Supported by ESTs:

NM_001342035.1

Supported by ESTs:

NM_001342036.1

Supported by ESTs:

NM_001342037.1

Supported by ESTs:

NM_119228.4

Supported by ESTs:

NM_179145.3

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables protein binding	IPI Inferred from Physical Interaction more info	PubMed

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
located_in chloroplast	ISM Inferred from Sequence Model more info
located_in nucleus	ISM Inferred from Sequence Model more info

General protein information

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Preferred Names: cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein

NP_001078472.1

cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cdk-activating kinase assembly factor (MAT1) (InterPro:IPR004575), Cdk-activating kinase assembly factor, MAT1 (InterPro:IPR015877); Has 365 Blast hits to 365 proteins in 175 species: Archae - 0; Bacteria - 0; Metazoa - 129; Fungi - 145; Plants - 58; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).

NP_567855.1

cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cdk-activating kinase assembly factor (MAT1) (InterPro:IPR004575), Cdk-activating kinase assembly factor, MAT1 (InterPro:IPR015877); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NP_849476.1

cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cdk-activating kinase assembly factor (MAT1) (InterPro:IPR004575), Cdk-activating kinase assembly factor, MAT1 (InterPro:IPR015877); Has 365 Blast hits to 365 proteins in 175 species: Archae - 0; Bacteria - 0; Metazoa - 129; Fungi - 145; Plants - 58; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003075.7 Reference assembly

Range

15006485..15008650

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_001342038.1 → NP_001328133.1 cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A178V1D2, A0A1P8B3Q7, A0A384LAZ7, A0A7G2F250

Conserved Domains (1) summary

cl40650
Location:1 → 35

MAT1; CDK-activating kinase assembly factor MAT1
NM_001342039.1 → NP_001328145.1 cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A1P8B3P6, A0A7G2F6Z7

Conserved Domains (1) summary

cl40650
Location:9 → 66

MAT1; CDK-activating kinase assembly factor MAT1
NM_001342040.1 → NP_001328146.1 cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A178V1D2, A0A1P8B3Q7, A0A384LAZ7, A0A7G2F250

Conserved Domains (1) summary

cl40650
Location:1 → 35

MAT1; CDK-activating kinase assembly factor MAT1
NM_001342042.1 → NP_001328135.1 cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A1P8B3P6, A0A7G2F6Z7

Conserved Domains (1) summary

cl40650
Location:9 → 66

MAT1; CDK-activating kinase assembly factor MAT1
NM_001342041.1 → NP_001328134.1 cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A178V1D2, A0A1P8B3Q7, A0A384LAZ7, A0A7G2F250

Conserved Domains (1) summary

cl40650
Location:1 → 35

MAT1; CDK-activating kinase assembly factor MAT1
NM_001342043.1 → NP_001328136.1 cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A1P8B3P6, A0A7G2F6Z7

Conserved Domains (1) summary

cl40650
Location:9 → 66

MAT1; CDK-activating kinase assembly factor MAT1
NM_179145.3 → NP_849476.1 cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_849476.1

Status: REVIEWED

UniProtKB/TrEMBL

Q84K40, Q8LES8

Conserved Domains (1) summary

cl40650
Location:12 → 81

MAT1; CDK-activating kinase assembly factor MAT1
NM_119228.4 → NP_567855.1 cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_567855.1

Status: REVIEWED

UniProtKB/TrEMBL

Q84K40, Q8LES8

Conserved Domains (1) summary

cl40650
Location:12 → 81

MAT1; CDK-activating kinase assembly factor MAT1
NM_001342021.1 → NP_001328140.1 cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A1P8B3P6, A0A7G2F6Z7

Conserved Domains (1) summary

cl40650
Location:9 → 66

MAT1; CDK-activating kinase assembly factor MAT1
NM_001342029.1 → NP_001328132.1 cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A1P8B3P6, A0A7G2F6Z7

Conserved Domains (1) summary

cl40650
Location:9 → 66

MAT1; CDK-activating kinase assembly factor MAT1
NM_001342027.1 → NP_001328131.1 cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

Q84K40, Q8LES8

Conserved Domains (1) summary

cl40650
Location:12 → 81

MAT1; CDK-activating kinase assembly factor MAT1
NM_001342031.1 → NP_001328153.1 cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A1P8B3T8, A0A654FUE1
NM_001342025.1 → NP_001328143.1 cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

Q84K40, Q8LES8

Conserved Domains (1) summary

cl40650
Location:12 → 81

MAT1; CDK-activating kinase assembly factor MAT1
NM_001342032.1 → NP_001328152.1 cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A178V1D2, A0A1P8B3Q7, A0A384LAZ7, A0A7G2F250

Conserved Domains (1) summary

cl40650
Location:1 → 35

MAT1; CDK-activating kinase assembly factor MAT1
NM_001342020.1 → NP_001328139.1 cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A1P8B3P5
NM_001342022.1 → NP_001328137.1 cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A1P8B3P5
NM_001342026.1 → NP_001328141.1 cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A1P8B3T8, A0A654FUE1
NM_001342033.1 → NP_001328151.1 cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A178V1D2, A0A1P8B3Q7, A0A384LAZ7, A0A7G2F250

Conserved Domains (1) summary

cl40650
Location:1 → 35

MAT1; CDK-activating kinase assembly factor MAT1
NM_001085003.2 → NP_001078472.1 cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_001078472.1

Status: REVIEWED

UniProtKB/TrEMBL

Q84K40, Q8LES8

Conserved Domains (1) summary

cl40650
Location:12 → 81

MAT1; CDK-activating kinase assembly factor MAT1
NM_001342028.1 → NP_001328144.1 cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A1P8B3P5
NM_001342023.1 → NP_001328138.1 cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A1P8B3P5
NM_001342024.1 → NP_001328142.1 cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A178V1D2, A0A1P8B3Q7, A0A384LAZ7, A0A7G2F250

Conserved Domains (1) summary

cl40650
Location:1 → 35

MAT1; CDK-activating kinase assembly factor MAT1
NM_001342030.1 → NP_001328154.1 cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

Q84K40, Q8LES8

Conserved Domains (1) summary

cl40650
Location:12 → 81

MAT1; CDK-activating kinase assembly factor MAT1
NM_001342034.1 → NP_001328150.1 cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A178V1D2, A0A1P8B3Q7, A0A384LAZ7, A0A7G2F250

Conserved Domains (1) summary

cl40650
Location:1 → 35

MAT1; CDK-activating kinase assembly factor MAT1
NM_001342035.1 → NP_001328149.1 cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A1P8B3P6, A0A7G2F6Z7

Conserved Domains (1) summary

cl40650
Location:9 → 66

MAT1; CDK-activating kinase assembly factor MAT1
NM_001342036.1 → NP_001328148.1 cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A178V1D2, A0A1P8B3Q7, A0A384LAZ7, A0A7G2F250

Conserved Domains (1) summary

cl40650
Location:1 → 35

MAT1; CDK-activating kinase assembly factor MAT1
NM_001342037.1 → NP_001328147.1 cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

Q84K40, Q8LES8

Conserved Domains (1) summary

cl40650
Location:12 → 81

MAT1; CDK-activating kinase assembly factor MAT1