STY2 Lateral root primordium (LRP) protein-like protein [Arabidopsis thaliana (thale cress)] - Gene

Summary

Official Symbol: STY2
Official Full Name: Lateral root primordium (LRP) protein-like protein
Primary source: TAIR:AT4G36260
Locus tag: AT4G36260
See related: Araport:AT4G36260
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: F23E13.150; F23E13_150; SHI RELATED SEQUENCE 2; SRS2; STYLISH 2
Summary: A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Encodes protein with a single zinc finger motif and a members of a small gene family of putative transcription factors in which the SHORT INTERNODES (SHI) gene is found. STY2/STY1 double mutants showed defective style, stigma as well as serrated leaves.
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Chromosome 4 - NC_003075.7 Genomic Context describing neighboring genes

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

NM_119794.3

Function	Evidence Code	Pubs
enables DNA-binding transcription factor activity	IEA Inferred from Electronic Annotation more info
enables DNA-binding transcription factor activity	NAS Non-traceable Author Statement more info
enables protein binding	IPI Inferred from Physical Interaction more info	PubMed

Process	Evidence Code	Pubs
acts_upstream_of_or_within anther development	IGI Inferred from Genetic Interaction more info	PubMed
acts_upstream_of_or_within negative regulation of gibberellic acid mediated signaling pathway	NAS Non-traceable Author Statement more info
acts_upstream_of_or_within pollen development	IGI Inferred from Genetic Interaction more info	PubMed
involved_in regulation of DNA-templated transcription	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within stigma development	IGI Inferred from Genetic Interaction more info	PubMed
acts_upstream_of_or_within style development	IGI Inferred from Genetic Interaction more info	PubMed
acts_upstream_of_or_within xylem and phloem pattern formation	IGI Inferred from Genetic Interaction more info	PubMed

Component	Evidence Code	Pubs
located_in nucleus	ISM Inferred from Sequence Model more info
located_in nucleus	ISS Inferred from Sequence or Structural Similarity more info	PubMed

NP_195349.1

STYLISH 2 (STY2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: xylem and phloem pattern formation, style development, auxin homeostasis, negative regulation of gibberellic acid mediated signaling pathway, stigma development; LOCATED IN: nucleus; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Lateral Root Primordium type 1, C-terminal (InterPro:IPR006511), Zinc finger, Lateral Root Primordium type 1 (InterPro:IPR006510), Protein of unknown function DUF702 (InterPro:IPR007818); BEST Arabidopsis thaliana protein match is: SHI-related sequence 4 (TAIR:AT2G18120.1); Has 2502 Blast hits to 2002 proteins in 224 species: Archae - 2; Bacteria - 961; Metazoa - 458; Fungi - 79; Plants - 348; Viruses - 38; Other Eukaryotes - 616 (source: NCBI BLink).

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