U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    MYB45 myb domain protein 45 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824053, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    MYB45
    Official Full Name
    myb domain protein 45
    Primary source
    TAIR:AT3G48920
    Locus tag
    AT3G48920
    See related
    Araport:AT3G48920
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtMYB45; myb domain protein 45
    Summary
    Member of the R2R3 factor gene family.
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See MYB45 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    3
    Sequence:
    Chromosome: 3; NC_003074.8 (18139172..18140772)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene membrane-associated progesterone binding protein 3 Neighboring gene single-stranded DNA endonuclease family protein Neighboring gene Nucleic acid-binding, OB-fold-like protein Neighboring gene Remorin family protein Neighboring gene Pectin lyase-like superfamily protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Riechmann JL, et al. Science, 2000 Dec 15. PMID 11118137
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help
    NM_114751.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    myb domain protein 45
    NP_190461.1
    • myb domain protein 45 (MYB45); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 18 (TAIR:AT4G25560.1); Has 8926 Blast hits to 8195 proteins in 505 species: Archae - 0; Bacteria - 0; Metazoa - 809; Fungi - 469; Plants - 5801; Viruses - 3; Other Eukaryotes - 1844 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      18139172..18140772
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_114751.2 → NP_190461.1  myb domain protein 45 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190461.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XJ31, A0A654FE50, Q9SMT1
      Conserved Domains (1) summary
      PLN03091
      Location:15 → 126
      PLN03091; hypothetical protein; Provisional
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools