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    PRP1 proline-rich protein 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841938, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PRP1
    Official Full Name
    proline-rich protein 1
    Primary source
    TAIR:AT1G54970
    Locus tag
    AT1G54970
    See related
    Araport:AT1G54970
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATPRP1; F14C21.50; F14C21_50; proline-rich protein 1; RHS7; ROOT HAIR SPECIFIC 7
    Summary
    encodes a proline-rich protein that is specifically expressed in the root.
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    Genomic context

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    See PRP1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (20504901..20506504)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene NPK1-related protein kinase 2 Neighboring gene Plant invertase/pectin methylesterase inhibitor superfamily protein Neighboring gene miscRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization and expression of four proline-rich cell wall protein genes in Arabidopsis encoding two distinct subsets of multiple domain proteins. Fowler TJ, et al. Plant Physiol, 1999 Dec. PMID 10594096, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_104371.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in plant-type cell wall ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    proline-rich protein 1
    NP_175895.1
    • proline-rich protein 1 (PRP1); CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: proline-rich protein 3 (TAIR:AT3G62680.1); Has 45300 Blast hits to 21383 proteins in 1373 species: Archae - 227; Bacteria - 7064; Metazoa - 17109; Fungi - 5177; Plants - 7680; Viruses - 1757; Other Eukaryotes - 6286 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      20504901..20506504
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_104371.2 → NP_175895.1  proline-rich protein 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175895.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FZ35, Q9M7P1
      UniProtKB/TrEMBL
      A0A178WBR5, A0A5S9WPU3, A0A654EK93
      Conserved Domains (2) summary
      pfam01190
      Location:214 → 296
      Pollen_Ole_e_I; Pollen proteins Ole e I like
      NF033804
      Location:26 → 170
      Streccoc_I_II; antigen I/II family LPXTG-anchored adhesin
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FZ35.1

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