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    ECT1 evolutionarily conserved C-terminal region 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819550, updated on 18-Sep-2024

    Summary

    Official Symbol
    ECT1
    Official Full Name
    evolutionarily conserved C-terminal region 1
    Primary source
    TAIR:AT3G03950
    Locus tag
    AT3G03950
    See related
    Araport:AT3G03950
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    evolutionarily conserved C-terminal region 1; T11I18.6; T11I18_6
    Summary
    Physically interacts with CIPK1. Located in the nucleus.
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    Genomic context

    See ECT1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    7
    Sequence:
    Chromosome: 3; NC_003074.8 (1021146..1024015)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene kinase-like protein Neighboring gene Protein kinase family protein Neighboring gene TCP-1/cpn60 chaperonin family protein Neighboring gene ARM repeat superfamily protein Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein

    Interactions

    General gene information

    NM_001035552.2
    NM_111266.2
    NM_180179.3

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in P-body PubMed 
    located_in cytoplasmic stress granule PubMed 
    located_in nucleus PubMed 
    located_in nucleus  

    General protein information

    Preferred Names
    evolutionarily conserved C-terminal region 1
    NP_001030629.1
    • evolutionarily conserved C-terminal region 1 (ECT1); CONTAINS InterPro DOMAIN/s: YTH domain (InterPro:IPR007275); BEST Arabidopsis thaliana protein match is: evolutionarily conserved C-terminal region 3 (TAIR:AT5G61020.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_566218.1
    • evolutionarily conserved C-terminal region 1 (ECT1); CONTAINS InterPro DOMAIN/s: YTH domain (InterPro:IPR007275); BEST Arabidopsis thaliana protein match is: evolutionarily conserved C-terminal region 3 (TAIR:AT5G61020.1); Has 965 Blast hits to 955 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 418; Fungi - 123; Plants - 338; Viruses - 0; Other Eukaryotes - 86 (source: NCBI BLink).
    NP_850510.1
    • evolutionarily conserved C-terminal region 1 (ECT1); CONTAINS InterPro DOMAIN/s: YTH domain (InterPro:IPR007275); BEST Arabidopsis thaliana protein match is: evolutionarily conserved C-terminal region 3 (TAIR:AT5G61020.1); Has 964 Blast hits to 954 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 417; Fungi - 123; Plants - 338; Viruses - 0; Other Eukaryotes - 86 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      1021146..1024015
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001035552.2 → NP_001030629.1  evolutionarily conserved C-terminal region 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001030629.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q3MK94, Q8W573, Q9SQR7
      UniProtKB/TrEMBL
      A0A654F3W6
      Conserved Domains (1) summary
      pfam04146
      Location:245 → 383
      YTH; YT521-B-like domain
    2. NM_180179.3 → NP_850510.1  evolutionarily conserved C-terminal region 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850510.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8W573
      Conserved Domains (1) summary
      pfam04146
      Location:241 → 379
      YTH; YT521-B-like domain
    3. NM_111266.2 → NP_566218.1  evolutionarily conserved C-terminal region 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566218.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4J2E9
      Conserved Domains (1) summary
      pfam04146
      Location:242 → 380
      YTH; YT521-B-like domain
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