U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CIPK1 CBL-interacting protein kinase 1 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 821016, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
CIPK1
Official Full Name
CBL-interacting protein kinase 1
Primary source
TAIR:AT3G17510
Locus tag
AT3G17510
See related
Araport:AT3G17510
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
CBL-interacting protein kinase 1; SNF1-RELATED PROTEIN KINASE 3.16; SnRK3.16
Summary
Encodes a CBL-interacting protein kinase. Specifically interacts with ECT1 and ECT2.
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CIPK1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
12
Sequence:
Chromosome: 3; NC_003074.8 (5988924..5993001, complement)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene F-box family protein Neighboring gene Late embryogenesis abundant protein (LEA) family protein Neighboring gene F-box and associated interaction domains-containing protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The Ca(2+) -regulated protein kinase CIPK1 integrates plant responses to phosphate deficiency in Arabidopsis thaliana. Lu X, et al. Plant Biol (Stuttg), 2020 Sep. PMID 32445589
  2. Arabidopsis K+ transporter HAK5-mediated high-affinity root K+ uptake is regulated by protein kinases CIPK1 and CIPK9. Lara A, et al. J Exp Bot, 2020 Aug 6. PMID 32484219, Free PMC Article
  3. Alternative complex formation of the Ca-regulated protein kinase CIPK1 controls abscisic acid-dependent and independent stress responses in Arabidopsis. D'Angelo C, et al. Plant J, 2006 Dec. PMID 17092313
  4. Multicolor bimolecular fluorescence complementation reveals simultaneous formation of alternative CBL/CIPK complexes in planta. Waadt R, et al. Plant J, 2008 Nov. PMID 18643980
  5. Novel CIPK1-associated proteins in Arabidopsis contain an evolutionarily conserved C-terminal region that mediates nuclear localization. Ok SH, et al. Plant Physiol, 2005 Sep. PMID 16113215, Free PMC Article

See all (16) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Arabidopsis K+ transporter HAK5-mediated high-affinity root K+ uptake is regulated by protein kinases CIPK1 and CIPK9.
    Title: Arabidopsis K+ transporter HAK5-mediated high-affinity root K+ uptake is regulated by protein kinases CIPK1 and CIPK9.
  2. The Ca(2+) -regulated protein kinase CIPK1 integrates plant responses to phosphate deficiency in Arabidopsis thaliana.
    Title: The Ca(2+) -regulated protein kinase CIPK1 integrates plant responses to phosphate deficiency in Arabidopsis thaliana.
  3. Two proteins containing the evolutionarily conserved C-terminal region (ECT1 and ECT2) may play a critical role in relaying the cytosolic Ca(2+) signals to the nucleus, thereby regulating gene expression.
    Title: Novel CIPK1-associated proteins in Arabidopsis contain an evolutionarily conserved C-terminal region that mediates nuclear localization.
  4. by alternative complex formation with either CBL1 or CBL9, the kinase CIPK1 represents a convergence point for abscisic acid-dependent and -independent stress responses.
    Title: Alternative complex formation of the Ca-regulated protein kinase CIPK1 controls abscisic acid-dependent and independent stress responses in Arabidopsis.
Submit: New GeneRIF Correction

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

NM_112631.3
NM_202599.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within response to abscisic acid IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within response to osmotic stress IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within response to salt stress IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  

General protein information

Go to the top of the page Help
Preferred Names
CBL-interacting protein kinase 1
NP_566580.1
  • CBL-interacting protein kinase 1 (CIPK1); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 17 (TAIR:AT1G48260.1); Has 128786 Blast hits to 126868 proteins in 3954 species: Archae - 151; Bacteria - 15250; Metazoa - 47593; Fungi - 12814; Plants - 31341; Viruses - 523; Other Eukaryotes - 21114 (source: NCBI BLink).
NP_974328.1
  • CBL-interacting protein kinase 1 (CIPK1); CONTAINS InterPro DOMAIN/s: NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 17 (TAIR:AT1G48260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    5988924..5993001 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_112631.3 → NP_566580.1  CBL-interacting protein kinase 1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566580.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q3EB49, Q8RWC9, Q9FUK2, Q9LUP6
    UniProtKB/TrEMBL
    A0A178VIP5, A0A5S9XDJ3, A0A7G2ENH3
    Conserved Domains (2) summary
    cd12195
    Location:319 → 432
    CIPK_C; C-terminal regulatory domain of Calcineurin B-Like (CBL)-interacting protein kinases
    cd14663
    Location:19 → 274
    STKc_SnRK3; Catalytic domain of the Serine/Threonine Kinases, Sucrose nonfermenting 1-related protein kinase subfamily 3

  2. NM_202599.2 → NP_974328.1  CBL-interacting protein kinase 1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_974328.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A7G2ENH3
    Conserved Domains (3) summary
    cd12195
    Location:239 → 352
    CIPK_C; C-terminal regulatory domain of Calcineurin B-Like (CBL)-interacting protein kinases
    smart00220
    Location:9 → 195
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cl21453
    Location:5 → 194
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8RWC9.2

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools