U.S. flag

An official website of the United States government

Links from GEO Profiles

    • Showing Current items.

    cytochrome c oxidase-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829939, updated on 18-Sep-2024

    Summary

    Official Full Name
    cytochrome c oxidase-like protein
    Primary source
    TAIR:AT4G37830
    Locus tag
    AT4G37830
    See related
    Araport:AT4G37830
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Location:
    chromosome: 4
    Exon count:
    4
    Sequence:
    Chromosome: 4; NC_003075.7 (17787524..17788834, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene EPIDERMAL PATTERNING FACTOR-like protein Neighboring gene uncharacterized protein Neighboring gene miscRNA Neighboring gene hexokinase-like 3

    Pathways from PubChem

    General gene information

    NM_001085041.2
    NM_001342457.1
    NM_119944.4

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in mitochondrion PubMed 
    located_in mitochondrion  
    part_of respiratory chain complex IV  

    General protein information

    Preferred Names
    cytochrome c oxidase-like protein
    NP_001078510.1
    • cytochrome c oxidase-related; FUNCTIONS IN: cytochrome-c oxidase activity; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit VIa (InterPro:IPR001349); Has 37 Blast hits to 37 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    NP_195496.1
    • cytochrome c oxidase-related; FUNCTIONS IN: cytochrome-c oxidase activity; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase, subunit VIa (InterPro:IPR001349); Has 184 Blast hits to 184 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 127; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      17787524..17788834 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119944.4 → NP_195496.1  cytochrome c oxidase-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195496.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8L974, Q9T070
      UniProtKB/TrEMBL
      A0A178V2F3, A0A654FWG7
      Conserved Domains (1) summary
      PLN02595
      Location:1 → 102
      PLN02595; cytochrome c oxidase subunit VI protein
    2. NM_001085041.2 → NP_001078510.1  cytochrome c oxidase-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078510.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V2F3, F4JSU5
      Conserved Domains (1) summary
      PLN02595
      Location:1 → 92
      PLN02595; cytochrome c oxidase subunit VI protein
    3. NM_001342457.1 → NP_001329576.1  cytochrome c oxidase-like protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B847
    External link. Please review our privacy policy.