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    CG13676 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 38906, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG13676provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0035844
    Locus tag
    Dmel_CG13676
    See related
    AllianceGenome:FB:FBgn0035844
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG13676
    Summary
    Predicted to enable chitin binding activity. Predicted to be located in extracellular region. Is expressed in embryonic/larval tracheal section. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG13676 in Genome Data Viewer
    Location:
    66B8-66B10; 3-22 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (8141868..8151813, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (8134968..8144913, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Ubiquitin-like activating enzyme 2 Neighboring gene CDP-diacylglycerol synthase Neighboring gene Senataxin Neighboring gene mutagen-sensitive 301 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Gene expression profiling of Drosophila tracheal fusion cells. Chandran RR, et al. Gene Expr Patterns, 2014 Jul. PMID 24928808
    2. Trachealess (Trh) regulates all tracheal genes during Drosophila embryogenesis. Chung S, et al. Dev Biol, 2011 Dec 1. PMID 21963537, Free PMC Article
    3. Identification of Drosophila Mutants Affecting Defense to an Entomopathogenic Fungus. Lu HL, et al. Sci Rep, 2015 Jul 23. PMID 26202798, Free PMC Article
    4. Genome-wide analysis in Drosophila reveals age-specific effects of SNPs on fitness traits. Durham MF, et al. Nat Commun, 2014 Jul 8. PMID 25000897
    5. Seizure control through genetic and pharmacological manipulation of Pumilio in Drosophila: a key component of neuronal homeostasis. Lin WH, et al. Dis Model Mech, 2017 Feb 1. PMID 28067623, Free PMC Article

    See all (26) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables chitin binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG13676-PA
    CG13676-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      8141868..8151813 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001274631.1 → NP_001261560.1  uncharacterized protein Dmel_CG13676, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001261560.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PEQ6
      Conserved Domains (1) summary
      pfam01607
      Location:130 → 182
      CBM_14; Chitin binding Peritrophin-A domain

    2. NM_139922.3 → NP_648179.3  uncharacterized protein Dmel_CG13676, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_648179.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8SX53, Q9VSE3
      Related
      FBpp0076455
      Conserved Domains (1) summary
      pfam01607
      Location:130 → 182
      CBM_14; Chitin binding Peritrophin-A domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    M9PEQ6 M9PEQ6
    Q8SX53 Q8SX53
    Q9VSE3 Q9VSE3

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