U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    lola longitudinals lacking [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 44548, updated on 17-Dec-2024

    Summary

    Official Symbol
    lolaprovided by FlyBase
    Official Full Name
    longitudinals lackingprovided by FlyBase
    Primary source
    FLYBASE:FBgn0283521
    Locus tag
    Dmel_CG12052
    See related
    AllianceGenome:FB:FBgn0283521
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:LD17006; BcDNA:RH31485; BEST:LD03274; bs06a08.y1; btb; BTB-IV; BtbIV; CG12052; CG18376; CG18378; CG18379; CG18380; CG18381; CG30012; CG30013; CG30014; Dmel\CG12052; eyeful; fus7; l(2)00642; l(2)s3697; LD03274; Lola; LOLA; NEST:bs06a08; sw59
    Summary
    Enables DNA binding activity. Involved in several processes, including larval development; neuron differentiation; and nurse cell apoptotic process. Located in cytoplasm and nucleus. Is expressed in several structures, including brain; central nervous system; male germline cell; sensory neurons; and ventral nerve cord. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See lola in Genome Data Viewer
    Location:
    47A11-47A13; 2-62 cM
    Exon count:
    31
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (10481894..10543291, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (6369399..6430796, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene pre-lola-G Neighboring gene translin Neighboring gene Peflin Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene antisense RNA:CR45135 Neighboring gene long non-coding RNA:acal Neighboring gene pipsqueak

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables DNA binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in R3/R4 cell fate commitment IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in R7 cell development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in axon guidance IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in axon guidance IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in axon midline choice point recognition IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in axon midline choice point recognition IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in axonogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in dendrite morphogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in gonad development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in larval lymph gland hemopoiesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in larval somatic muscle development IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    involved_in larval somatic muscle development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in nurse cell apoptotic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in positive regulation of DNA-templated transcription ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    involved_in positive regulation of biosynthetic process of antibacterial peptides active against Gram-negative bacteria HMP PubMed 
    involved_in positive regulation of peptidoglycan recognition protein signaling pathway HMP PubMed 
    involved_in regulation of DNA-templated transcription IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in regulation of axon guidance IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in regulation of gene expression IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleoplasm HDA PubMed 
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    longitudinals lacking
    Names
    BTB-protein-IV
    CG12052-PA
    CG12052-PAA
    CG12052-PB
    CG12052-PC
    CG12052-PD
    CG12052-PE
    CG12052-PF
    CG12052-PG
    CG12052-PH
    CG12052-PI
    CG12052-PJ
    CG12052-PK
    CG12052-PL
    CG12052-PM
    CG12052-PO
    CG12052-PP
    CG12052-PQ
    CG12052-PR
    CG12052-PT
    CG12052-PU
    CG12052-PV
    CG12052-PW
    CG12052-PX
    CG12052-PY
    CG12052-PZ
    SGP cluster fusion defects 7
    bumper-to-bumper
    e
    eyeful
    lola
    lola-PA
    lola-PAA
    lola-PB
    lola-PC
    lola-PD
    lola-PE
    lola-PF
    lola-PG
    lola-PH
    lola-PI
    lola-PJ
    lola-PK
    lola-PL
    lola-PM
    lola-PO
    lola-PP
    lola-PQ
    lola-PR
    lola-PT
    lola-PU
    lola-PV
    lola-PW
    lola-PX
    lola-PY
    lola-PZ
    longitudinal lacking
    longitudinals absent
    longitudinals-lacking
    misguided

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      10481894..10543291 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_080027.6NP_524766.2  longitudinals lacking, isoform G [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_524766.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P42283, Q54A11, Q9V5M2
      Conserved Domains (4) summary
      smart00225
      Location:33117
      BTB; Broad-Complex, Tramtrack and Bric a brac
      sd00017
      Location:793813
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00651
      Location:22117
      BTB; BTB/POZ domain
      pfam13909
      Location:821844
      zf-H2C2_5; C2H2-type zinc-finger domain
    2. NM_176132.4NP_788312.2  longitudinals lacking, isoform R [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_788312.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P42283, Q54A11, Q9V5M2
      Conserved Domains (4) summary
      smart00225
      Location:33117
      BTB; Broad-Complex, Tramtrack and Bric a brac
      sd00017
      Location:793813
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00651
      Location:22117
      BTB; BTB/POZ domain
      pfam13909
      Location:821844
      zf-H2C2_5; C2H2-type zinc-finger domain
    3. NM_206083.4NP_995805.1  longitudinals lacking, isoform X [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_995805.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9V5M3
      Conserved Domains (3) summary
      smart00225
      Location:33117
      BTB; Broad-Complex, Tramtrack and Bric a brac
      pfam00651
      Location:22117
      BTB; BTB/POZ domain
      pfam13909
      Location:576598
      zf-H2C2_5; C2H2-type zinc-finger domain
    4. NM_206082.4NP_995804.1  longitudinals lacking, isoform Y [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_995804.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9V5M3
      Conserved Domains (4) summary
      smart00225
      Location:33117
      BTB; Broad-Complex, Tramtrack and Bric a brac
      sd00017
      Location:466484
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00651
      Location:22117
      BTB; BTB/POZ domain
      pfam13894
      Location:493515
      zf-C2H2_4; C2H2-type zinc finger
    5. NM_206084.4NP_995806.1  longitudinals lacking, isoform W [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_995806.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q7KQY7, Q7KQY8, Q867I9, Q867J2, Q867U5, Q867Y0, Q86BC4, Q9V5M3
      Conserved Domains (4) summary
      smart00225
      Location:33117
      BTB; Broad-Complex, Tramtrack and Bric a brac
      sd00017
      Location:711727
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00651
      Location:22117
      BTB; BTB/POZ domain
      pfam13909
      Location:738761
      zf-H2C2_5; C2H2-type zinc-finger domain
    6. NM_176129.5NP_788309.2  longitudinals lacking, isoform O [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_788309.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9V5M3
      Related
      FBpp0088395
      Conserved Domains (4) summary
      smart00225
      Location:33117
      BTB; Broad-Complex, Tramtrack and Bric a brac
      sd00017
      Location:532552
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00651
      Location:22117
      BTB; BTB/POZ domain
      pfam12171
      Location:532560
      zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
    7. NM_176130.5NP_788310.2  longitudinals lacking, isoform J [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_788310.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9V5M6
      Related
      FBpp0088394
      Conserved Domains (4) summary
      smart00225
      Location:33117
      BTB; Broad-Complex, Tramtrack and Bric a brac
      sd00017
      Location:705725
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:732754
      zf-C2H2; Zinc finger, C2H2 type
      pfam00651
      Location:22117
      BTB; BTB/POZ domain
    8. NM_176131.5NP_788311.2  longitudinals lacking, isoform P [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_788311.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q058V9, Q4AB07, Q867J5, Q867M8, Q867P1, Q867T8, Q86BC2, Q8MKX4, Q9V5M5, Q9V5M6
      Related
      FBpp0088389
      Conserved Domains (3) summary
      smart00225
      Location:33117
      BTB; Broad-Complex, Tramtrack and Bric a brac
      sd00017
      Location:851871
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00651
      Location:22117
      BTB; BTB/POZ domain
    9. NM_170617.5NP_724945.1  longitudinals lacking, isoform H [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_724945.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P42284
      Related
      FBpp0088380
      Conserved Domains (2) summary
      smart00225
      Location:33117
      BTB; Broad-Complex, Tramtrack and Bric a brac
      pfam00651
      Location:22117
      BTB; BTB/POZ domain
    10. NM_170618.5NP_724946.1  longitudinals lacking, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_724946.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A4UZC4, Q0E9C9, Q7KQZ4, Q867I7, Q867S0, Q867S9, Q8MKX5, Q95TS0
      Related
      FBpp0088379
      Conserved Domains (3) summary
      smart00225
      Location:33117
      BTB; Broad-Complex, Tramtrack and Bric a brac
      sd00019
      Location:687707
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00651
      Location:22117
      BTB; BTB/POZ domain
    11. NM_170619.3NP_724949.2  longitudinals lacking, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_724949.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A4UZC4, Q0E9C9, Q7KQZ4, Q867I7, Q867S0, Q867S9, Q8MKX5, Q95TS0
      Conserved Domains (3) summary
      smart00225
      Location:33117
      BTB; Broad-Complex, Tramtrack and Bric a brac
      sd00019
      Location:687707
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00651
      Location:22117
      BTB; BTB/POZ domain
    12. NM_176128.5NP_788308.3  longitudinals lacking, isoform AA [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_788308.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A4UZC3, Q867F7, Q867K2, Q867T0, Q867Z4, Q86BC3, Q8MKX6, Q8MZH5
      Conserved Domains (3) summary
      smart00225
      Location:33117
      BTB; Broad-Complex, Tramtrack and Bric a brac
      sd00017
      Location:905925
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00651
      Location:22117
      BTB; BTB/POZ domain
    13. NM_176133.5NP_788313.1  longitudinals lacking, isoform I [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_788313.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A4UZC3, Q867F7, Q867K2, Q867T0, Q867Z4, Q86BC3, Q8MKX6, Q8MZH5
      Related
      FBpp0088384
      Conserved Domains (3) summary
      smart00225
      Location:33117
      BTB; Broad-Complex, Tramtrack and Bric a brac
      sd00017
      Location:905925
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00651
      Location:22117
      BTB; BTB/POZ domain
    14. NM_176134.4NP_788314.1  longitudinals lacking, isoform T [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_788314.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q867Z4
      Related
      FBpp0088393
      Conserved Domains (3) summary
      smart00225
      Location:33117
      BTB; Broad-Complex, Tramtrack and Bric a brac
      sd00019
      Location:480500
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00651
      Location:22117
      BTB; BTB/POZ domain
    15. NM_176135.4NP_788315.1  longitudinals lacking, isoform U [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_788315.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q867Z4
      Related
      FBpp0088385
      Conserved Domains (3) summary
      smart00225
      Location:33117
      BTB; Broad-Complex, Tramtrack and Bric a brac
      sd00019
      Location:480500
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00651
      Location:22117
      BTB; BTB/POZ domain
    16. NM_170622.6NP_724952.2  longitudinals lacking, isoform F [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_724952.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q867Z4
      Related
      FBpp0088382
      Conserved Domains (5) summary
      smart00225
      Location:33117
      BTB; Broad-Complex, Tramtrack and Bric a brac
      sd00017
      Location:507529
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:536555
      zf-C2H2; Zinc finger, C2H2 type
      pfam00651
      Location:22117
      BTB; BTB/POZ domain
      pfam13465
      Location:521547
      zf-H2C2_2; Zinc-finger double domain
    17. NM_176136.5NP_788316.2  longitudinals lacking, isoform K [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_788316.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q867Z4
      Related
      FBpp0088387
      Conserved Domains (4) summary
      smart00225
      Location:33117
      BTB; Broad-Complex, Tramtrack and Bric a brac
      sd00019
      Location:465488
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:495517
      zf-C2H2; Zinc finger, C2H2 type
      pfam00651
      Location:22117
      BTB; BTB/POZ domain
    18. NM_206085.4NP_995807.1  longitudinals lacking, isoform V [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_995807.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P42284, Q867M9, Q867R1, Q868A5
      Conserved Domains (2) summary
      smart00225
      Location:33117
      BTB; Broad-Complex, Tramtrack and Bric a brac
      pfam00651
      Location:22117
      BTB; BTB/POZ domain
    19. NM_170620.4NP_724950.1  longitudinals lacking, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_724950.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q7KQZ4
      Related
      FBpp0088383
      Conserved Domains (3) summary
      smart00225
      Location:33117
      BTB; Broad-Complex, Tramtrack and Bric a brac
      sd00017
      Location:481501
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00651
      Location:22117
      BTB; BTB/POZ domain
    20. NM_170621.4NP_724951.1  longitudinals lacking, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_724951.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q7KQZ4
      Related
      FBpp0088376
      Conserved Domains (3) summary
      smart00225
      Location:33117
      BTB; Broad-Complex, Tramtrack and Bric a brac
      sd00017
      Location:481501
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00651
      Location:22117
      BTB; BTB/POZ domain
    21. NM_001032229.3NP_001027400.1  longitudinals lacking, isoform Z [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001027400.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9V5M6
      Conserved Domains (3) summary
      smart00225
      Location:33117
      BTB; Broad-Complex, Tramtrack and Bric a brac
      pfam00651
      Location:22117
      BTB; BTB/POZ domain
      pfam13909
      Location:634658
      zf-H2C2_5; C2H2-type zinc-finger domain
    22. NM_170623.6NP_724953.2  longitudinals lacking, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_724953.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q7KQZ4
      Related
      FBpp0088378
      Conserved Domains (4) summary
      smart00225
      Location:33117
      BTB; Broad-Complex, Tramtrack and Bric a brac
      sd00017
      Location:528545
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00651
      Location:22117
      BTB; BTB/POZ domain
      pfam05605
      Location:524578
      zf-Di19; Drought induced 19 protein (Di19), zinc-binding
    23. NM_176138.5NP_788318.1  longitudinals lacking, isoform L [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_788318.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q7KQZ4
      Related
      FBpp0088386
      Conserved Domains (4) summary
      smart00225
      Location:33117
      BTB; Broad-Complex, Tramtrack and Bric a brac
      sd00019
      Location:551571
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:578602
      zf-C2H2; Zinc finger, C2H2 type
      pfam00651
      Location:22117
      BTB; BTB/POZ domain
    24. NM_176139.3NP_788319.1  longitudinals lacking, isoform Q [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_788319.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      D3DMG1
      Related
      FBpp0088390
      Conserved Domains (4) summary
      smart00225
      Location:33117
      BTB; Broad-Complex, Tramtrack and Bric a brac
      sd00017
      Location:546564
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00651
      Location:22117
      BTB; BTB/POZ domain
      pfam13465
      Location:559584
      zf-H2C2_2; Zinc-finger double domain
    25. NM_176140.4NP_788320.1  longitudinals lacking, isoform M [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_788320.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P42284
      Related
      FBpp0088396
      Conserved Domains (2) summary
      smart00225
      Location:33117
      BTB; Broad-Complex, Tramtrack and Bric a brac
      pfam00651
      Location:22117
      BTB; BTB/POZ domain