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    CCDC136 coiled-coil domain containing 136 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 701874, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CCDC136provided by VGNC
    Official Full Name
    coiled-coil domain containing 136provided by VGNC
    Primary source
    VGNC:VGNC:70836
    See related
    Ensembl:ENSMMUG00000009625
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See CCDC136 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (155039887..155070926)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (154836613..154867550)

    Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene opsin 1, short wave sensitive Neighboring gene transfer RNA proline (anticodon AGG) Neighboring gene filamin C Neighboring gene ATPase H+ transporting V1 subunit F

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Form deprivation modulates retinal neurogenesis in primate experimental myopia. Tkatchenko AV, et al. Proc Natl Acad Sci U S A, 2006 Mar 21. PMID 16537371, Free PMC Article
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in acrosome assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in single fertilization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in acrosomal membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    coiled-coil domain-containing protein 136

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041756.1 Reference Mmul_10 Primary Assembly

      Range
      155039887..155070926
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015134871.2 → XP_014990357.1  coiled-coil domain-containing protein 136 isoform X8

      UniProtKB/TrEMBL
      F6YQZ1
      Related
      ENSMMUP00000012606.3, ENSMMUT00000013454.3
      Conserved Domains (1) summary
      pfam07106
      Location:144 → 243
      TBPIP; Tat binding protein 1(TBP-1)-interacting protein (TBPIP)

    2. XM_015134865.2 → XP_014990351.1  coiled-coil domain-containing protein 136 isoform X1

      UniProtKB/TrEMBL
      A0A5F8A4T9, G7MMB4
      Related
      ENSMMUP00000072958.1, ENSMMUT00000086187.1
      Conserved Domains (2) summary
      TIGR02168
      Location:275 → 1020
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      cl23720
      Location:105 → 194
      RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)

    3. XM_001090156.4 → XP_001090156.2  coiled-coil domain-containing protein 136 isoform X3

      UniProtKB/TrEMBL
      F6YR17, G7MMB4
      Related
      ENSMMUP00000012602.4, ENSMMUT00000013450.4
      Conserved Domains (2) summary
      TIGR02168
      Location:275 → 1020
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      cl23720
      Location:105 → 194
      RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)

    4. XM_015134867.2 → XP_014990353.1  coiled-coil domain-containing protein 136 isoform X2

      UniProtKB/TrEMBL
      G7MMB4
      Conserved Domains (2) summary
      TIGR02168
      Location:275 → 1020
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      cl23720
      Location:105 → 194
      RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)

    5. XM_015134870.2 → XP_014990356.1  coiled-coil domain-containing protein 136 isoform X5

      UniProtKB/TrEMBL
      F6ZYP2
      Related
      ENSMMUP00000012593.2, ENSMMUT00000013440.3
      Conserved Domains (2) summary
      COG0419
      Location:155 → 797
      SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
      COG1196
      Location:84 → 451
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    6. XM_015134869.2 → XP_014990355.1  coiled-coil domain-containing protein 136 isoform X4

      UniProtKB/TrEMBL
      A0A5F7ZL74, A0A5F8AAY4
      Related
      ENSMMUP00000074081.1, ENSMMUT00000081345.1
      Conserved Domains (2) summary
      TIGR02168
      Location:101 → 848
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      cl23720
      Location:105 → 194
      RILP-like; Rab interacting lysosomal protein-like 1 and 2 (Rilpl1 and Rilpl2)

    7. XM_028846260.1 → XP_028702093.1  coiled-coil domain-containing protein 136 isoform X6

      Conserved Domains (2) summary
      COG1196
      Location:84 → 451
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:346 → 684
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    8. XM_028846261.1 → XP_028702094.1  coiled-coil domain-containing protein 136 isoform X7

      Conserved Domains (2) summary
      COG1196
      Location:84 → 451
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:346 → 682
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
    Nucleotide Protein
    Heading Accession and Version

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