U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    PECAM1 platelet and endothelial cell adhesion molecule 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 718302, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    PECAM1provided by VGNC
    Official Full Name
    platelet and endothelial cell adhesion molecule 1provided by VGNC
    Primary source
    VGNC:VGNC:75938
    See related
    Ensembl:ENSMMUG00000011809
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See PECAM1 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (60880550..60963969, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (57941706..58034565, complement)

    Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106994091 Neighboring gene small nucleolar RNA SNORD104 Neighboring gene small nucleolar RNA SNORA76 Neighboring gene testis expressed 2 Neighboring gene mast cell immunoglobulin like receptor 1 Neighboring gene ATP synthase subunit f, mitochondrial pseudogene Neighboring gene DNA polymerase gamma 2, accessory subunit

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transmembrane signaling receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell surface receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell-cell adhesion via plasma-membrane adhesion molecules IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    platelet endothelial cell adhesion molecule

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041769.1 Reference Mmul_10 Primary Assembly

      Range
      60880550..60963969 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015120107.2 → XP_014975593.1  platelet endothelial cell adhesion molecule isoform X1

      UniProtKB/TrEMBL
      A0A5F8A4M1, F7BHW6, H9FVR0
      Related
      ENSMMUP00000061428.1, ENSMMUT00000088767.1
      Conserved Domains (4) summary
      smart00410
      Location:43 → 127
      IG_like; Immunoglobulin like
      pfam13895
      Location:328 → 404
      Ig_2; Immunoglobulin domain
      pfam13927
      Location:504 → 576
      Ig_3; Immunoglobulin domain
      cl11960
      Location:43 → 127
      Ig; Immunoglobulin domain

    2. XM_015120106.2 → XP_014975592.1  platelet endothelial cell adhesion molecule isoform X1

      UniProtKB/TrEMBL
      A0A5F8A4M1, F7BHW6, H9FVR0
      Related
      ENSMMUP00000064096.1, ENSMMUT00000081895.1
      Conserved Domains (4) summary
      smart00410
      Location:43 → 127
      IG_like; Immunoglobulin like
      pfam13895
      Location:328 → 404
      Ig_2; Immunoglobulin domain
      pfam13927
      Location:504 → 576
      Ig_3; Immunoglobulin domain
      cl11960
      Location:43 → 127
      Ig; Immunoglobulin domain

    3. XM_015120108.2 → XP_014975594.1  platelet endothelial cell adhesion molecule isoform X1

      UniProtKB/TrEMBL
      A0A5F8A4M1, F7BHW6, H9FVR0
      Related
      ENSMMUP00000069696.1, ENSMMUT00000105489.1
      Conserved Domains (4) summary
      smart00410
      Location:43 → 127
      IG_like; Immunoglobulin like
      pfam13895
      Location:328 → 404
      Ig_2; Immunoglobulin domain
      pfam13927
      Location:504 → 576
      Ig_3; Immunoglobulin domain
      cl11960
      Location:43 → 127
      Ig; Immunoglobulin domain

    4. XM_015120105.2 → XP_014975591.1  platelet endothelial cell adhesion molecule isoform X1

      UniProtKB/TrEMBL
      A0A5F8A4M1, F7BHW6, H9FVR0
      Related
      ENSMMUP00000071853.1, ENSMMUT00000084492.1
      Conserved Domains (4) summary
      smart00410
      Location:43 → 127
      IG_like; Immunoglobulin like
      pfam13895
      Location:328 → 404
      Ig_2; Immunoglobulin domain
      pfam13927
      Location:504 → 576
      Ig_3; Immunoglobulin domain
      cl11960
      Location:43 → 127
      Ig; Immunoglobulin domain

    5. XM_015120111.2 → XP_014975597.1  platelet endothelial cell adhesion molecule isoform X4

      UniProtKB/TrEMBL
      A0A5F8A4M1, A0A5F8A9M0
      Related
      ENSMMUP00000074074.1, ENSMMUT00000100833.1
      Conserved Domains (4) summary
      smart00410
      Location:43 → 127
      IG_like; Immunoglobulin like
      pfam13895
      Location:328 → 404
      Ig_2; Immunoglobulin domain
      pfam13927
      Location:504 → 576
      Ig_3; Immunoglobulin domain
      cl11960
      Location:43 → 127
      Ig; Immunoglobulin domain

    6. XM_015120110.2 → XP_014975596.1  platelet endothelial cell adhesion molecule isoform X3

      UniProtKB/TrEMBL
      A0A5F7ZKR7, A0A5F8A4M1
      Related
      ENSMMUP00000065218.1, ENSMMUT00000086195.1
      Conserved Domains (4) summary
      smart00410
      Location:43 → 127
      IG_like; Immunoglobulin like
      pfam13895
      Location:328 → 404
      Ig_2; Immunoglobulin domain
      pfam13927
      Location:504 → 576
      Ig_3; Immunoglobulin domain
      cl11960
      Location:43 → 127
      Ig; Immunoglobulin domain

    7. XM_015120109.2 → XP_014975595.1  platelet endothelial cell adhesion molecule isoform X2

      UniProtKB/TrEMBL
      A0A5F8A4M1, A0A5K1UVM9
      Related
      ENSMMUP00000034187.3, ENSMMUT00000041152.3
      Conserved Domains (4) summary
      smart00410
      Location:43 → 127
      IG_like; Immunoglobulin like
      pfam13895
      Location:328 → 404
      Ig_2; Immunoglobulin domain
      pfam13927
      Location:504 → 576
      Ig_3; Immunoglobulin domain
      cl11960
      Location:43 → 127
      Ig; Immunoglobulin domain

    8. XM_015120112.2 → XP_014975598.1  platelet endothelial cell adhesion molecule isoform X5

      UniProtKB/TrEMBL
      A0A5F8A4M1
      Conserved Domains (4) summary
      smart00410
      Location:43 → 127
      IG_like; Immunoglobulin like
      pfam13895
      Location:328 → 404
      Ig_2; Immunoglobulin domain
      pfam13927
      Location:504 → 576
      Ig_3; Immunoglobulin domain
      cl11960
      Location:43 → 127
      Ig; Immunoglobulin domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.