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    SDCCAG8 SHH signaling and ciliogenesis regulator SDCCAG8 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 705545, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SDCCAG8provided by VGNC
    Official Full Name
    SHH signaling and ciliogenesis regulator SDCCAG8provided by VGNC
    Primary source
    VGNC:VGNC:96558
    Locus tag
    EGK_02072
    See related
    Ensembl:ENSMMUG00000019994
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SDCCAG8 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    25
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (5629544..5879964, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (219680088..219929440)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114678658 Neighboring gene AKT serine/threonine kinase 3 Neighboring gene fatty acid-binding protein, brain pseudogene Neighboring gene microRNA mir-4677 Neighboring gene centrosomal protein 170 Neighboring gene probable ribosome biogenesis protein RLP24 Neighboring gene 60S ribosomal protein L10a pseudogene Neighboring gene phospholipase D family member 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in centrosome cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in establishment of cell polarity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neuron migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in tube formation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in centriole IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in centrosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    serologically defined colon cancer antigen 8

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      5629544..5879964 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015127561.2 → XP_014983047.1  serologically defined colon cancer antigen 8 isoform X6

      UniProtKB/TrEMBL
      A0A1D5QNB3
      Conserved Domains (1) summary
      pfam15964
      Location:94 → 778
      CCCAP; Centrosomal colon cancer autoantigen protein family

    2. XM_028849285.1 → XP_028705118.1  serologically defined colon cancer antigen 8 isoform X5

      UniProtKB/TrEMBL
      A0A1D5RGM5, A0A5F7ZEP1
      Related
      ENSMMUP00000059469.1, ENSMMUT00000069525.2
      Conserved Domains (1) summary
      pfam15964
      Location:6 → 703
      CCCAP; Centrosomal colon cancer autoantigen protein family

    3. XM_028849292.1 → XP_028705125.1  serologically defined colon cancer antigen 8 isoform X13

      Conserved Domains (1) summary
      pfam15964
      Location:18 → 414
      CCCAP; Centrosomal colon cancer autoantigen protein family

    4. XM_028849279.1 → XP_028705112.1  serologically defined colon cancer antigen 8 isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZEP1
      Conserved Domains (1) summary
      pfam15964
      Location:60 → 742
      CCCAP; Centrosomal colon cancer autoantigen protein family

    5. XM_028849282.1 → XP_028705115.1  serologically defined colon cancer antigen 8 isoform X3

      UniProtKB/TrEMBL
      A0A1D5QZ02
      Conserved Domains (1) summary
      pfam15964
      Location:94 → 734
      CCCAP; Centrosomal colon cancer autoantigen protein family

    6. XM_015127589.2 → XP_014983075.1  serologically defined colon cancer antigen 8 isoform X12

      UniProtKB/TrEMBL
      A0A1D5QNB3
      Conserved Domains (1) summary
      pfam15964
      Location:94 → 654
      CCCAP; Centrosomal colon cancer autoantigen protein family

    7. XM_028849289.1 → XP_028705122.1  serologically defined colon cancer antigen 8 isoform X12

      UniProtKB/TrEMBL
      A0A1D5QNB3
      Conserved Domains (1) summary
      pfam15964
      Location:94 → 654
      CCCAP; Centrosomal colon cancer autoantigen protein family

    8. XM_015127574.2 → XP_014983060.1  serologically defined colon cancer antigen 8 isoform X9

      UniProtKB/TrEMBL
      A0A1D5QNB3
      Conserved Domains (1) summary
      pfam15964
      Location:94 → 733
      CCCAP; Centrosomal colon cancer autoantigen protein family

    9. XM_028849283.1 → XP_028705116.1  serologically defined colon cancer antigen 8 isoform X4

      UniProtKB/TrEMBL
      A0A1D5QNB3
      Related
      ENSMMUP00000026291.4, ENSMMUT00000028101.4
      Conserved Domains (1) summary
      pfam15964
      Location:94 → 776
      CCCAP; Centrosomal colon cancer autoantigen protein family

    10. XM_028849277.1 → XP_028705110.1  serologically defined colon cancer antigen 8 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QNB3
      Conserved Domains (1) summary
      pfam15964
      Location:94 → 776
      CCCAP; Centrosomal colon cancer autoantigen protein family

    11. XM_001092411.3 → XP_001092411.1  serologically defined colon cancer antigen 8 isoform X11

      See identical proteins and their annotated locations for XP_001092411.1

      UniProtKB/TrEMBL
      A0A663DJ30, A0A8J8Y4A5, F7FNJ0, G7MFL0, H9FP08
      Related
      ENSMMUP00000026290.4, ENSMMUT00000028100.4
      Conserved Domains (1) summary
      pfam15964
      Location:6 → 705
      CCCAP; Centrosomal colon cancer autoantigen protein family

    12. XM_015127566.2 → XP_014983052.1  serologically defined colon cancer antigen 8 isoform X7

      UniProtKB/TrEMBL
      A0A1D5QNB3
      Related
      ENSMMUP00000049539.2, ENSMMUT00000054448.2
      Conserved Domains (1) summary
      pfam15964
      Location:94 → 776
      CCCAP; Centrosomal colon cancer autoantigen protein family

    13. XM_028849286.1 → XP_028705119.1  serologically defined colon cancer antigen 8 isoform X8

      UniProtKB/TrEMBL
      A0A1D5QNB3, A0A5F7ZJT2
      Related
      ENSMMUP00000075785.1, ENSMMUT00000093829.1
      Conserved Domains (1) summary
      pfam15964
      Location:94 → 736
      CCCAP; Centrosomal colon cancer autoantigen protein family

    14. XM_028849287.1 → XP_028705120.1  serologically defined colon cancer antigen 8 isoform X8

      UniProtKB/TrEMBL
      A0A1D5QNB3, A0A5F7ZJT2
      Related
      ENSMMUP00000064879.1, ENSMMUT00000101388.1
      Conserved Domains (1) summary
      pfam15964
      Location:94 → 736
      CCCAP; Centrosomal colon cancer autoantigen protein family

    15. XM_015127580.2 → XP_014983066.1  serologically defined colon cancer antigen 8 isoform X10

      UniProtKB/TrEMBL
      A0A1D5QNB3
      Conserved Domains (1) summary
      pfam15964
      Location:94 → 734
      CCCAP; Centrosomal colon cancer autoantigen protein family
    Nucleotide Protein
    Heading Accession and Version

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