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    MKLN1 muskelin 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 704338, updated on 17-Aug-2024

    Summary

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    Official Symbol
    MKLN1provided by VGNC
    Official Full Name
    muskelin 1provided by VGNC
    Primary source
    VGNC:VGNC:74875
    See related
    Ensembl:ENSMMUG00000018259
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See MKLN1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (157640711..157800240)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (157445180..157603565)

    Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106997664 Neighboring gene 60S ribosomal protein L27 pseudogene Neighboring gene uncharacterized LOC114677032 Neighboring gene uncharacterized LOC114677033 Neighboring gene podocalyxin like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    muskelin
    Names
    muskelin 1, intracellular mediator containing kelch motifs

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001260802.2 → NP_001247731.1  muskelin

      See identical proteins and their annotated locations for NP_001247731.1

      Status: PROVISIONAL

      Source sequence(s)
      JU470557
      UniProtKB/TrEMBL
      F7HQ23, G7MME1, H9YUJ5
      Related
      ENSMMUP00000024003.4, ENSMMUT00000025658.4
      Conserved Domains (4) summary
      PLN02153
      Location:307 → 475
      PLN02153; epithiospecifier protein
      sd00038
      Location:271 → 323
      Kelch; KELCH repeat [structural motif]
      pfam06588
      Location:12 → 207
      Muskelin_N; Muskelin N-terminus
      pfam13415
      Location:282 → 334
      Kelch_3; Galactose oxidase, central domain

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041756.1 Reference Mmul_10 Primary Assembly

      Range
      157640711..157800240
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028844896.1 → XP_028700729.1  muskelin isoform X2

      UniProtKB/TrEMBL
      G7MME1
      Related
      ENSMMUP00000034798.3, ENSMMUT00000041784.3
      Conserved Domains (4) summary
      PLN02153
      Location:307 → 475
      PLN02153; epithiospecifier protein
      sd00038
      Location:271 → 323
      Kelch; KELCH repeat [structural motif]
      pfam06588
      Location:12 → 207
      Muskelin_N; Muskelin N-terminus
      pfam13415
      Location:282 → 334
      Kelch_3; Galactose oxidase, central domain

    2. XM_028844895.1 → XP_028700728.1  muskelin isoform X1

      UniProtKB/TrEMBL
      G7MME1
      Conserved Domains (4) summary
      PLN02153
      Location:307 → 475
      PLN02153; epithiospecifier protein
      sd00038
      Location:271 → 323
      Kelch; KELCH repeat [structural motif]
      pfam06588
      Location:12 → 207
      Muskelin_N; Muskelin N-terminus
      pfam13415
      Location:282 → 334
      Kelch_3; Galactose oxidase, central domain

    3. XM_028844897.1 → XP_028700730.1  muskelin isoform X3

      UniProtKB/TrEMBL
      G7MME1
      Conserved Domains (4) summary
      PLN02153
      Location:307 → 475
      PLN02153; epithiospecifier protein
      sd00038
      Location:271 → 323
      Kelch; KELCH repeat [structural motif]
      pfam06588
      Location:12 → 207
      Muskelin_N; Muskelin N-terminus
      pfam13415
      Location:282 → 334
      Kelch_3; Galactose oxidase, central domain

    4. XM_015134905.2 → XP_014990391.1  muskelin isoform X4

      UniProtKB/TrEMBL
      G7MME1
      Conserved Domains (4) summary
      sd00038
      Location:271 → 322
      Kelch; KELCH repeat [structural motif]
      pfam01344
      Location:393 → 419
      Kelch_1; Kelch motif
      pfam06588
      Location:12 → 207
      Muskelin_N; Muskelin N-terminus
      pfam13415
      Location:282 → 334
      Kelch_3; Galactose oxidase, central domain

    5. XM_028844898.1 → XP_028700731.1  muskelin isoform X5

      Conserved Domains (3) summary
      PLN02153
      Location:100 → 268
      PLN02153; epithiospecifier protein
      sd00038
      Location:64 → 116
      Kelch; KELCH repeat [structural motif]
      pfam13415
      Location:75 → 127
      Kelch_3; Galactose oxidase, central domain

    RNA

    1. XR_001443850.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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