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    Prr14l proline rich 14-like [ Rattus norvegicus (Norway rat) ]

    Gene ID: 305466, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Prr14lprovided by RGD
    Official Full Name
    proline rich 14-likeprovided by RGD
    Primary source
    RGD:1305469
    See related
    EnsemblRapid:ENSRNOG00000048891 AllianceGenome:RGD:1305469
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1305469
    Summary
    Orthologous to human PRR14L (proline rich 14 like). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Thymus (RPKM 135.7), Spleen (RPKM 120.5) and 9 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See Prr14l in Genome Data Viewer
    Location:
    14q21
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 14 NC_086032.1 (82094360..82160985)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 14 NC_051349.1 (77869848..77937141)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 14 NC_005113.4 (83226552..83293823)

    Chromosome 14 - NC_086032.1Genomic Context describing neighboring genes Neighboring gene DEP domain containing 5, GATOR1 subcomplex subunit Neighboring gene U6 spliceosomal RNA Neighboring gene ATP synthase subunit epsilon, mitochondrial-like Neighboring gene phosphatidylserine decarboxylase Neighboring gene SFI1 centrin binding protein Neighboring gene uncharacterized LOC134481863

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    protein PRR14L

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086032.1 Reference GRCr8

      Range
      82094360..82160985
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_223586.10 → XP_223586.5  protein PRR14L isoform X1

      See identical proteins and their annotated locations for XP_223586.5

      UniProtKB/TrEMBL
      A0A8I5Y6D9, M0RAJ5
      Related
      ENSRNOP00000066545.3, ENSRNOT00000072368.4
      Conserved Domains (1) summary
      pfam15386
      Location:1853 → 1906
      Tantalus; Drosophila Tantalus-like

    2. XM_039092536.2 → XP_038948464.1  protein PRR14L isoform X2

      UniProtKB/TrEMBL
      A0A8I5Y6D9
      Conserved Domains (1) summary
      pfam15386
      Location:1829 → 1882
      Tantalus; Drosophila Tantalus-like

    3. XM_039092537.2 → XP_038948465.1  protein PRR14L isoform X3

      UniProtKB/TrEMBL
      A0A8I5Y6D9

    4. XM_039092538.2 → XP_038948466.1  protein PRR14L isoform X4

      UniProtKB/TrEMBL
      A0A8I5Y6D9
      Conserved Domains (1) summary
      pfam15386
      Location:1725 → 1778
      Tantalus; Drosophila Tantalus-like

    5. XM_006251416.5 → XP_006251478.1  protein PRR14L isoform X1

      See identical proteins and their annotated locations for XP_006251478.1

      UniProtKB/TrEMBL
      A0A8I5Y6D9, M0RAJ5
      Conserved Domains (1) summary
      pfam15386
      Location:1853 → 1906
      Tantalus; Drosophila Tantalus-like

    6. XM_063273843.1 → XP_063129913.1  protein PRR14L isoform X5

      UniProtKB/TrEMBL
      A0A8I5Y6D9

    7. XM_039092539.2 → XP_038948467.1  protein PRR14L isoform X6

      UniProtKB/TrEMBL
      A0A8I5Y6D9
      Conserved Domains (1) summary
      pfam15386
      Location:1647 → 1700
      Tantalus; Drosophila Tantalus-like

    8. XM_063273841.1 → XP_063129911.1  protein PRR14L isoform X5

      UniProtKB/TrEMBL
      A0A8I5Y6D9

    9. XM_063273842.1 → XP_063129912.1  protein PRR14L isoform X5

      UniProtKB/TrEMBL
      A0A8I5Y6D9
    Nucleotide Protein Strain
    Heading Accession and Version

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