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Conserved domains on  [gi|1958677519|ref|XP_038948466|]
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protein PRR14L isoform X4 [Rattus norvegicus]

Protein Classification

PHA03247 and Tantalus domain-containing protein( domain architecture ID 10634106)

PHA03247 and Tantalus domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Tantalus pfam15386
Drosophila Tantalus-like; An alpha+beta fold domain found in metazoan proteins such as ...
 1721-1778 2.62e-23

Drosophila Tantalus-like; An alpha+beta fold domain found in metazoan proteins such as Drosophila Tantalus. Drosophila Tantalus binds the chromatin protein Additional sex combs (Asx) and also binds DNA in vitro.


:

Pssm-ID: 464693  Cd Length: 57  Bit Score: 94.41  E-value: 2.62e-23
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 1958677519 1721 LTPMGLPRPKRLKKKEFSLEEIYTNKNYKSPPAsRCLETIFEEPKERNGTLISISQQK 1778
Cdd:pfam15386    1 RTPMGLPRPIRVKKKEFSIEEIYTNKNYKKPTN-KNLETIFEEPSDENGAIVYVSSRK 57
 
Name Accession Description Interval E-value
Tantalus pfam15386
Drosophila Tantalus-like; An alpha+beta fold domain found in metazoan proteins such as ...
 1721-1778 2.62e-23

Drosophila Tantalus-like; An alpha+beta fold domain found in metazoan proteins such as Drosophila Tantalus. Drosophila Tantalus binds the chromatin protein Additional sex combs (Asx) and also binds DNA in vitro.


Pssm-ID: 464693  Cd Length: 57  Bit Score: 94.41  E-value: 2.62e-23
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 1958677519 1721 LTPMGLPRPKRLKKKEFSLEEIYTNKNYKSPPAsRCLETIFEEPKERNGTLISISQQK 1778
Cdd:pfam15386    1 RTPMGLPRPIRVKKKEFSIEEIYTNKNYKKPTN-KNLETIFEEPSDENGAIVYVSSRK 57
 
Name Accession Description Interval E-value
Tantalus pfam15386
Drosophila Tantalus-like; An alpha+beta fold domain found in metazoan proteins such as ...
 1721-1778 2.62e-23

Drosophila Tantalus-like; An alpha+beta fold domain found in metazoan proteins such as Drosophila Tantalus. Drosophila Tantalus binds the chromatin protein Additional sex combs (Asx) and also binds DNA in vitro.


Pssm-ID: 464693  Cd Length: 57  Bit Score: 94.41  E-value: 2.62e-23
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 1958677519 1721 LTPMGLPRPKRLKKKEFSLEEIYTNKNYKSPPAsRCLETIFEEPKERNGTLISISQQK 1778
Cdd:pfam15386    1 RTPMGLPRPIRVKKKEFSIEEIYTNKNYKKPTN-KNLETIFEEPSDENGAIVYVSSRK 57
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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