commd3 COMM domain containing 3 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: commd3provided by ZNC
Official Full Name: COMM domain containing 3provided by ZNC
Primary source: ZFIN:ZDB-GENE-041219-3
See related: Ensembl:ENSDARG00000045402 AllianceGenome:ZFIN:ZDB-GENE-041219-3
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:103771
Summary: Predicted to act upstream of or within sodium ion transport. Orthologous to human COMMD3 (COMM domain containing 3). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 24

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	24	NC_007135.7 (17256807..17259643)
105	previous assembly	GRCz10 (GCF_000002035.5)	24	NC_007135.6 (17112388..17115224)

Chromosome 24 - NC_007135.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within sodium ion transport	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info

General protein information

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Preferred Names: COMM domain-containing protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001008734.2 → NP_001008734.1 COMM domain-containing protein 3

See identical proteins and their annotated locations for NP_001008734.1

Status: PROVISIONAL

Source sequence(s)

BC086852

UniProtKB/TrEMBL

Q5M9N2

Related

ENSDARP00000066763.3, ENSDART00000066764.5

Conserved Domains (1) summary

cd04751
Location:97 → 191

Commd3; COMM_Domain containing protein 3. The COMM Domain is found at the C-terminus of a variety of proteins; presumably all COMM_Domain containing proteins are located in the nucleus and the COMM domain plays a role in protein-protein interactions. Several ...