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    ATXN3 ataxin 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 720515, updated on 1-Aug-2024

    Summary

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    Gene symbol
    ATXN3
    Gene description
    ataxin 3
    See related
    Ensembl:ENSMMUG00000020751
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ATXN3 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 7 NC_041760.1 (154181842..154250636, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 7 NC_027899.1 (154246691..154307633, complement)

    Chromosome 7 - NC_041760.1Genomic Context describing neighboring genes Neighboring gene fibulin 5 Neighboring gene peptidyl-prolyl cis-trans isomerase A pseudogene Neighboring gene thyroid hormone receptor interactor 11 Neighboring gene uncharacterized LOC106999545 Neighboring gene uncharacterized LOC114679627 Neighboring gene NADH:ubiquinone oxidoreductase subunit B1 Neighboring gene cleavage and polyadenylation specific factor 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cysteine-type deubiquitinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein deubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ataxin-3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041760.1 Reference Mmul_10 Primary Assembly

      Range
      154181842..154250636 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015144387.2 → XP_014999873.1  ataxin-3 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QJ89, H9FUL0
      Related
      ENSMMUP00000058137.1, ENSMMUT00000061760.2
      Conserved Domains (2) summary
      pfam02099
      Location:9 → 163
      Josephin; Josephin
      pfam16619
      Location:264 → 327
      SUIM_assoc; Unstructured region C-term to UIM in Ataxin3

    2. XM_015144391.2 → XP_014999877.1  ataxin-3 isoform X4

      Conserved Domains (2) summary
      pfam02099
      Location:5 → 42
      Josephin; Josephin
      pfam16619
      Location:143 → 206
      SUIM_assoc; Unstructured region C-term to UIM in Ataxin3

    3. XM_015144389.2 → XP_014999875.1  ataxin-3 isoform X2

      UniProtKB/TrEMBL
      A0A1D5QWL7
      Related
      ENSMMUP00000052447.2, ENSMMUT00000055948.2
      Conserved Domains (2) summary
      pfam02099
      Location:9 → 112
      Josephin; Josephin
      pfam16619
      Location:213 → 276
      SUIM_assoc; Unstructured region C-term to UIM in Ataxin3

    4. XM_015144390.2 → XP_014999876.1  ataxin-3 isoform X3

      Related
      ENSMMUP00000027313.4, ENSMMUT00000029191.4
      Conserved Domains (2) summary
      pfam02099
      Location:9 → 163
      Josephin
      pfam16619
      Location:263 → 292
      SUIM_assoc; Unstructured region C-term to UIM in Ataxin3

    RNA

    1. XR_001446407.2 RNA Sequence

    2. XR_001446408.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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