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    SDHC succinate dehydrogenase complex subunit C [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 719978, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SDHCprovided by VGNC
    Official Full Name
    succinate dehydrogenase complex subunit Cprovided by VGNC
    Primary source
    VGNC:VGNC:77147
    Locus tag
    EGK_01538
    See related
    Ensembl:ENSMMUG00000012411
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SDHC in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 1 NC_041754.1 (89588021..89632810, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 1 NC_027893.1 (136045992..136090091)

    Chromosome 1 - NC_041754.1Genomic Context describing neighboring genes Neighboring gene transfer RNA valine (anticodon CAC) Neighboring gene uncharacterized LOC106993201 Neighboring gene cilia and flagella associated protein 126 Neighboring gene myelin protein zero Neighboring gene Purkinje cell protein 4 like 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Form deprivation modulates retinal neurogenesis in primate experimental myopia. Tkatchenko AV, et al. Proc Natl Acad Sci U S A, 2006 Mar 21. PMID 16537371, Free PMC Article
    2. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    3. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables electron transfer activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables succinate dehydrogenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mitochondrial electron transport, succinate to ubiquinone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in tricarboxylic acid cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    succinate dehydrogenase cytochrome b560 subunit, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001193587.1 → NP_001180516.1  succinate dehydrogenase cytochrome b560 subunit, mitochondrial

      See identical proteins and their annotated locations for NP_001180516.1

      Status: VALIDATED

      Source sequence(s)
      CB310906, CB554299
      UniProtKB/TrEMBL
      G7MEA1, I0FJD9
      Related
      ENSMMUP00000038516.2, ENSMMUT00000017397.4
      Conserved Domains (1) summary
      cd03499
      Location:50 → 152
      SQR_TypeC_SdhC; Succinate:quinone oxidoreductase (SQR) Type C subfamily, Succinate dehydrogenase C (SdhC) subunit; composed of bacterial SdhC and eukaryotic large cytochrome b binding (CybL) proteins. SQR catalyzes the oxidation of succinate to fumarate coupled to the ...

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041754.1 Reference Mmul_10 Primary Assembly

      Range
      89588021..89632810 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015113131.2 → XP_014968617.1  succinate dehydrogenase cytochrome b560 subunit, mitochondrial isoform X2

      UniProtKB/TrEMBL
      I2CTM5
      Conserved Domains (1) summary
      cl00881
      Location:50 → 79
      SQR_QFR_TM; Succinate:quinone oxidoreductase (SQR) and Quinol:fumarate reductase (QFR) family, transmembrane subunits; SQR catalyzes the oxidation of succinate to fumarate coupled to the reduction of quinone to quinol, while QFR catalyzes the reverse reaction. SQR, ...

    2. XM_028846281.1 → XP_028702114.1  succinate dehydrogenase cytochrome b560 subunit, mitochondrial isoform X3

      UniProtKB/TrEMBL
      H9F7W5
      Conserved Domains (1) summary
      cd03499
      Location:13 → 115
      SQR_TypeC_SdhC; Succinate:quinone oxidoreductase (SQR) Type C subfamily, Succinate dehydrogenase C (SdhC) subunit; composed of bacterial SdhC and eukaryotic large cytochrome b binding (CybL) proteins. SQR catalyzes the oxidation of succinate to fumarate coupled to the ...

    3. XM_028846272.1 → XP_028702105.1  succinate dehydrogenase cytochrome b560 subunit, mitochondrial isoform X1

      UniProtKB/TrEMBL
      H9F7W5
      Conserved Domains (1) summary
      cd03499
      Location:47 → 149
      SQR_TypeC_SdhC; Succinate:quinone oxidoreductase (SQR) Type C subfamily, Succinate dehydrogenase C (SdhC) subunit; composed of bacterial SdhC and eukaryotic large cytochrome b binding (CybL) proteins. SQR catalyzes the oxidation of succinate to fumarate coupled to the ...

    4. XM_028846284.1 → XP_028702117.1  succinate dehydrogenase cytochrome b560 subunit, mitochondrial isoform X3

      UniProtKB/TrEMBL
      H9F7W5
      Conserved Domains (1) summary
      cd03499
      Location:13 → 115
      SQR_TypeC_SdhC; Succinate:quinone oxidoreductase (SQR) Type C subfamily, Succinate dehydrogenase C (SdhC) subunit; composed of bacterial SdhC and eukaryotic large cytochrome b binding (CybL) proteins. SQR catalyzes the oxidation of succinate to fumarate coupled to the ...
    Nucleotide Protein
    Heading Accession and Version

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