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LOC9310130 dynein assembly factor 1, axonemal [ Arabidopsis lyrata subsp. lyrata ]

Gene ID: 9310130, updated on 21-Dec-2023

Summary

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Gene symbol
LOC9310130
Gene description
dynein assembly factor 1, axonemal
Locus tag
ARALYDRAFT_489085
Gene type
protein coding
RefSeq status
MODEL
Organism
Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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See LOC9310130 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302550.1 (9308377..9310949, complement)

NW_003302550.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein At5g41620 Neighboring gene uncharacterized protein At1g43920, Chloroplastic Neighboring gene ruvB-like protein 1 Neighboring gene uncharacterized LOC9310132

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003302550 Unplaced Scaffold Reference v.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dynein assembly factor 1, axonemal

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v.1.0 Primary Assembly

Genomic

  1. NW_003302550.1 Reference v.1.0 Primary Assembly

    Range
    9308377..9310949 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002874017.2 → XP_002874063.1  dynein assembly factor 1, axonemal

    See identical proteins and their annotated locations for XP_002874063.1

    UniProtKB/TrEMBL
    D7M0W4
    Conserved Domains (3) summary
    cd00116
    Location:21 → 237
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00033
    Location:21 → 42
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:108 → 164
    LRR_8; Leucine rich repeat
Nucleotide Protein
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