U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Rhomboid-related intramembrane serine protease family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 843753, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Full Name
Rhomboid-related intramembrane serine protease family protein
Primary source
TAIR:AT1G74130
Locus tag
AT1G74130
See related
Araport:AT1G74130
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F9E11.2; F9E11_2
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 1
Exon count:
8
Sequence:
Chromosome: 1; NC_003070.9 (27873611..27876033)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene cytochrome P450, family 78, subfamily A, polypeptide 10 Neighboring gene Mitochondrial transcription termination factor family protein Neighboring gene Rhomboid-related intramembrane serine protease family protein Neighboring gene Galactose oxidase/kelch repeat superfamily protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

NM_106073.5
NM_202412.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables serine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  

General protein information

Go to the top of the page Help
Preferred Names
Rhomboid-related intramembrane serine protease family protein
NP_177553.3
  • Rhomboid-related intramembrane serine protease family protein; FUNCTIONS IN: serine-type endopeptidase activity; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: Rhomboid-related intramembrane serine protease family protein (TAIR:AT1G74140.5); Has 1475 Blast hits to 1475 proteins in 563 species: Archae - 48; Bacteria - 988; Metazoa - 11; Fungi - 87; Plants - 67; Viruses - 0; Other Eukaryotes - 274 (source: NCBI BLink).
NP_974141.1
  • Rhomboid-related intramembrane serine protease family protein; FUNCTIONS IN: serine-type endopeptidase activity; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Peptidase S54, rhomboid (InterPro:IPR002610); BEST Arabidopsis thaliana protein match is: Rhomboid-related intramembrane serine protease family protein (TAIR:AT1G74140.5); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    27873611..27876033
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_106073.5 → NP_177553.3  Rhomboid-related intramembrane serine protease family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_177553.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4HTU5, Q84WG3, Q9C6A2
    UniProtKB/TrEMBL
    A0A178W4B5, A0A5S9WU85, A0A654ENW2
    Conserved Domains (1) summary
    cl21536
    Location:156 → 223
    Rhomboid; Rhomboid family

  2. NM_202412.1 → NP_974141.1  Rhomboid-related intramembrane serine protease family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_974141.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q84WG3
    Conserved Domains (1) summary
    cl21536
    Location:156 → 223
    Rhomboid; Rhomboid family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q84WG3.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.