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Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 842604, updated on 18-Sep-2024

Summary

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Official Full Name
Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein
Primary source
TAIR:AT1G63010
Locus tag
AT1G63010
See related
Araport:AT1G63010
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F16P17.18; F16P17_18
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Genomic context

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Location:
chromosome: 1
Exon count:
14
Sequence:
Chromosome: 1; NC_003070.9 (23347561..23352831, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene nucleotide-rhamnose synthase/epimerase-reductase Neighboring gene ncRNA Neighboring gene nuclear RNA polymerase D1A Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Vacuolar Phosphate Transporter 1 (VPT1) Affects Arsenate Tolerance by Regulating Phosphate Homeostasis in Arabidopsis. Luan M, et al. Plant Cell Physiol, 2018 Jul 1. PMID 29420798
  2. A vacuolar phosphate transporter essential for phosphate homeostasis in Arabidopsis. Liu J, et al. Proc Natl Acad Sci U S A, 2015 Nov 24. PMID 26554016, Free PMC Article
  3. Vacuolar Phosphate Transporters Contribute to Systemic Phosphate Homeostasis Vital for Reproductive Development in Arabidopsis. Luan M, et al. Plant Physiol, 2019 Feb. PMID 30552198, Free PMC Article
  4. Identification of plant vacuolar transporters mediating phosphate storage. Liu TY, et al. Nat Commun, 2016 Mar 31. PMID 27029856, Free PMC Article
  5. Mapping the Arabidopsis organelle proteome. Dunkley TP, et al. Proc Natl Acad Sci U S A, 2006 Apr 25. PMID 16618929, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. VPT1 (AT1G63010) contributes to cytosol-to-vacuole phosphate partitioning and reproductive development.
    Title: Vacuolar Phosphate Transporters Contribute to Systemic Phosphate Homeostasis Vital for Reproductive Development in Arabidopsis.
  2. VPT1 role in the arsenate tolerance and phosphate homeostasis.
    Title: Vacuolar Phosphate Transporter 1 (VPT1) Affects Arsenate Tolerance by Regulating Phosphate Homeostasis in Arabidopsis.
  3. VPT1 is a transporter responsible for vacuolar phosphate (Pi) storage and is essential for Pi adaptation in Arabidopsis.[VPT1]
    Title: A vacuolar phosphate transporter essential for phosphate homeostasis in Arabidopsis.
Submit: New GeneRIF Correction

General gene information

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NM_001084293.1
NM_001084294.2
NM_001198368.1
NM_001334059.1
NM_001334060.1
NM_104979.4
NM_202344.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables phosphate transmembrane transporter activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables phosphate transmembrane transporter activity IGI
Inferred from Genetic Interaction
more info
 PubMed 
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within phosphate ion homeostasis IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within phosphate ion homeostasis IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within phosphate ion transport IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within transmembrane phosphate ion transport from cytosol to vacuole IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within transmembrane phosphate ion transport from cytosol to vacuole IGI
Inferred from Genetic Interaction
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in Golgi apparatus HDA PubMed 
located_in nucleus HDA PubMed 
located_in plant-type vacuole HDA PubMed 
located_in plant-type vacuole membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  
located_in vacuolar membrane HDA PubMed 
located_in vacuole HDA PubMed 

General protein information

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Preferred Names
Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein
NP_001077762.1
  • Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein; INVOLVED IN: transmembrane transport; LOCATED IN: vacuolar membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein (TAIR:AT4G22990.2); Has 2617 Blast hits to 2616 proteins in 868 species: Archae - 45; Bacteria - 1644; Metazoa - 146; Fungi - 352; Plants - 233; Viruses - 1; Other Eukaryotes - 196 (source: NCBI BLink).
NP_001077763.1
  • Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein; INVOLVED IN: transmembrane transport; LOCATED IN: vacuolar membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein (TAIR:AT4G22990.2); Has 2617 Blast hits to 2616 proteins in 868 species: Archae - 45; Bacteria - 1644; Metazoa - 146; Fungi - 352; Plants - 233; Viruses - 1; Other Eukaryotes - 196 (source: NCBI BLink).
NP_001185297.1
  • Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein; INVOLVED IN: transmembrane transport; LOCATED IN: vacuolar membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein (TAIR:AT4G22990.2).
NP_564807.2
  • Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein; INVOLVED IN: transmembrane transport; LOCATED IN: vacuolar membrane, plant-type vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein (TAIR:AT4G22990.2); Has 2617 Blast hits to 2616 proteins in 868 species: Archae - 45; Bacteria - 1644; Metazoa - 146; Fungi - 352; Plants - 233; Viruses - 1; Other Eukaryotes - 196 (source: NCBI BLink).
NP_974073.2
  • Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein; INVOLVED IN: transmembrane transport; LOCATED IN: vacuolar membrane, plant-type vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SPX, N-terminal (InterPro:IPR004331), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein (TAIR:AT4G22990.2); Has 2641 Blast hits to 2640 proteins in 874 species: Archae - 45; Bacteria - 1658; Metazoa - 145; Fungi - 361; Plants - 235; Viruses - 1; Other Eukaryotes - 196 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    23347561..23352831 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001198368.1 → NP_001185297.1  Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001185297.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9WP20, A0A654EW84, F4I0G7
    Conserved Domains (4) summary
    cd06174
    Location:266 → 440
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    cd14479
    Location:2 → 150
    SPX-MFS_plant; SPX domain of proteins found in plants and stramenopiles; most have a C-terminal MFS domain
    pfam03105
    Location:4 → 154
    SPX; SPX domain
    pfam07690
    Location:266 → 651
    MFS_1; Major Facilitator Superfamily

  2. NM_001084294.2 → NP_001077763.1  Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001077763.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9WP20, A0A654EW84, F4I0G4
    Conserved Domains (2) summary
    cd14479
    Location:2 → 141
    SPX-MFS_plant; SPX domain of proteins found in plants and stramenopiles; most have a C-terminal MFS domain
    cl28910
    Location:249 → 657
    MFS; Major Facilitator Superfamily

  3. NM_202344.2 → NP_974073.2  Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_974073.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q2V4F9, Q94C80, Q9CAP0, Q9LQ03
    UniProtKB/TrEMBL
    A0A5S9WP20, A0A654EW84
    Conserved Domains (4) summary
    cd06174
    Location:257 → 431
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    cd14479
    Location:2 → 141
    SPX-MFS_plant; SPX domain of proteins found in plants and stramenopiles; most have a C-terminal MFS domain
    pfam03105
    Location:4 → 145
    SPX; SPX domain
    pfam07690
    Location:257 → 640
    MFS_1; Major Facilitator Superfamily

  4. NM_104979.4 → NP_564807.2  Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564807.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9WP20, A0A654EW84, F4I0G4
    Conserved Domains (2) summary
    cd14479
    Location:2 → 141
    SPX-MFS_plant; SPX domain of proteins found in plants and stramenopiles; most have a C-terminal MFS domain
    cl28910
    Location:249 → 657
    MFS; Major Facilitator Superfamily

  5. NM_001084293.1 → NP_001077762.1  Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001077762.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9WP20, A0A654EW84, F4I0G4
    Conserved Domains (2) summary
    cd14479
    Location:2 → 141
    SPX-MFS_plant; SPX domain of proteins found in plants and stramenopiles; most have a C-terminal MFS domain
    cl28910
    Location:249 → 657
    MFS; Major Facilitator Superfamily

  6. NM_001334060.1 → NP_001322579.1  Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9WP20, A0A654EW84, F4I0G4
    Conserved Domains (2) summary
    cd14479
    Location:2 → 141
    SPX-MFS_plant; SPX domain of proteins found in plants and stramenopiles; most have a C-terminal MFS domain
    cl28910
    Location:249 → 657
    MFS; Major Facilitator Superfamily

  7. NM_001334059.1 → NP_001322578.1  Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9WP20, A0A654EW84, F4I0G4
    Conserved Domains (2) summary
    cd14479
    Location:2 → 141
    SPX-MFS_plant; SPX domain of proteins found in plants and stramenopiles; most have a C-terminal MFS domain
    cl28910
    Location:249 → 657
    MFS; Major Facilitator Superfamily
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q2V4F9.1

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