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RLP2 receptor like protein 2 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 838295, updated on 18-Sep-2024

Summary

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Official Symbol
RLP2
Official Full Name
receptor like protein 2
Primary source
TAIR:AT1G17240
Locus tag
AT1G17240
See related
Araport:AT1G17240
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AtRLP2; F20D23.6; F20D23_6; receptor like protein 2
Summary
Encodes a CLAVATA2 (CLV2)-related gene. Complements the clv2 mutant when expressed under the control of the CLV2 promoter.
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Genomic context

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See RLP2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_003070.9 (5896385..5898931, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Leucine-rich receptor-like protein kinase family protein Neighboring gene ROTUNDIFOLIA like 11 Neighboring gene ncRNA Neighboring gene receptor like protein 3 Neighboring gene autoinhibited H[+]-ATPase isoform 10

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Functional analyses of the CLAVATA2-like proteins and their domains that contribute to CLAVATA2 specificity. Wang G, et al. Plant Physiol, 2010 Jan. PMID 19897604, Free PMC Article
  2. The leucine-rich repeat as a protein recognition motif. Kobe B, et al. Curr Opin Struct Biol, 2001 Dec. PMID 11751054
  3. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

NM_101585.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
involved_in meristem maintenance IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within signal transduction IC
Inferred by Curator
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
receptor like protein 2
NP_173167.1
  • receptor like protein 2 (RLP2); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: Leucine-rich receptor-like protein kinase family protein (TAIR:AT1G72300.1); Has 90767 Blast hits to 27052 proteins in 1087 species: Archae - 40; Bacteria - 7835; Metazoa - 18686; Fungi - 1120; Plants - 55519; Viruses - 2; Other Eukaryotes - 7565 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    5896385..5898931 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001332285.1 → NP_001320953.1  receptor like protein 2 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W7V5, A0A1P8APD8, A0A654ECK6
    Conserved Domains (3) summary
    PLN00113
    Location:36 → 702
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
    sd00031
    Location:655 → 666
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:121 → 145
    LRR_RI; leucine-rich repeat [structural motif]

  2. NM_101585.3 → NP_173167.1  receptor like protein 2 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_173167.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SHI3
    UniProtKB/TrEMBL
    A0A178W7V5
    Conserved Domains (5) summary
    cd00116
    Location:294 → 427
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00031
    Location:650 → 661
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:116 → 140
    LRR_RI; leucine-rich repeat [structural motif]
    pfam08263
    Location:47 → 85
    LRRNT_2; Leucine rich repeat N-terminal domain
    pfam13855
    Location:115 → 181
    LRR_8; Leucine rich repeat
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SHI3.1

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