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proline-rich family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 834571, updated on 18-Sep-2024

Summary

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Official Full Name
proline-rich family protein
Primary source
TAIR:AT5G45350
Locus tag
AT5G45350
See related
Araport:AT5G45350
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MFC19.1; MFC19_1
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Genomic context

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Location:
chromosome: 5
Exon count:
4
Sequence:
Chromosome: 5; NC_003076.8 (18381799..18384069, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene decapping 5-like protein Neighboring gene cytochrome P450, family 707, subfamily A, polypeptide 3 Neighboring gene F-box family protein Neighboring gene nodulin MtN21 /EamA-like transporter family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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NM_001085247.2
NM_001344610.1
NM_001344611.1
NM_001344612.1
NM_001344613.1
NM_001344614.1
NM_123903.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
proline-rich family protein
NP_001078716.1
  • proline-rich family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 42407 Blast hits to 20194 proteins in 1070 species: Archae - 8; Bacteria - 5895; Metazoa - 21667; Fungi - 4381; Plants - 5932; Viruses - 698; Other Eukaryotes - 3826 (source: NCBI BLink).
NP_568642.1
  • proline-rich family protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    18381799..18384069 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_123903.3 → NP_568642.1  proline-rich family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_568642.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UMX6, A0A384L5J6, Q39115

  2. NM_001085247.2 → NP_001078716.1  proline-rich family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001078716.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UMX6, A0A384L5J6, Q39115

  3. NM_001344614.1 → NP_001332035.1  proline-rich family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BFQ4

  4. NM_001344612.1 → NP_001332037.1  proline-rich family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BFQ4

  5. NM_001344611.1 → NP_001332038.1  proline-rich family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UMX6, A0A384L5J6, Q39115

  6. NM_001344610.1 → NP_001332034.1  proline-rich family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BFQ4

  7. NM_001344613.1 → NP_001332036.1  proline-rich family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UMX6, A0A384L5J6, Q39115
Nucleotide Protein
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