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DENN (AEX-3) domain-containing protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 833521, updated on 18-Sep-2024

Summary

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Official Full Name
DENN (AEX-3) domain-containing protein
Primary source
TAIR:AT5G35560
Locus tag
AT5G35560
See related
Araport:AT5G35560
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MOK9.21; MOK9_21
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Genomic context

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Location:
chromosome: 5
Exon count:
20
Sequence:
Chromosome: 5; NC_003076.8 (13742072..13748318, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene O-fucosyltransferase family protein Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_122947.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
DENN (AEX-3) domain-containing protein
NP_568527.2
  • DENN (AEX-3) domain-containing protein; CONTAINS InterPro DOMAIN/s: uDENN (InterPro:IPR005113), dDENN (InterPro:IPR005112), DENN (InterPro:IPR001194); BEST Arabidopsis thaliana protein match is: DENN (AEX-3) domain-containing protein (TAIR:AT2G20320.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    13742072..13748318 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001344110.1 → NP_001330572.1  DENN (AEX-3) domain-containing protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BB75, A0A654G5D4, A0A7G2FBE6
    Conserved Domains (3) summary
    smart00799
    Location:429 → 613
    DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
    pfam03455
    Location:701 → 737
    dDENN; dDENN domain
    pfam03456
    Location:160 → 236
    uDENN; uDENN domain

  2. NM_122947.4 → NP_568527.2  DENN (AEX-3) domain-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_568527.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UKD1, A0A7G2FBE6, F4JZV9
    Conserved Domains (3) summary
    smart00799
    Location:455 → 639
    DENN; Domain found in a variety of signalling proteins, always encircled by uDENN and dDENN
    pfam03455
    Location:727 → 763
    dDENN; dDENN domain
    pfam03456
    Location:160 → 236
    uDENN; uDENN domain
Nucleotide Protein
Heading Accession and Version

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