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NSH3 inosine-uridine preferring nucleoside hydrolase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 832004, updated on 18-Sep-2024

Summary

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Official Symbol
NSH3
Official Full Name
inosine-uridine preferring nucleoside hydrolase family protein
Primary source
TAIR:AT5G18860
Locus tag
AT5G18860
See related
Araport:AT5G18860
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F17K4.110; F17K4_110; nucleoside hydrolase 3
Summary
Encodes a purine nucleoside hydrolase active in the apoplast. It might play a role in salvaging extracellular ATP. NSH3 transcript levels rise in response to jasmonic acid and wounding.
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Genomic context

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See NSH3 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
12
Sequence:
Chromosome: 5; NC_003076.8 (6290358..6295815)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene squamosa promoter binding protein-like 7 Neighboring gene Major facilitator superfamily protein Neighboring gene Low-density receptor-like protein Neighboring gene Inosine-uridine preferring nucleoside hydrolase family protein Neighboring gene RNA-directed DNA polymerase (reverse transcriptase)-related family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A proteomic approach to apoplastic proteins involved in cell wall regeneration in protoplasts of Arabidopsis suspension-cultured cells. Kwon HK, et al. Plant Cell Physiol, 2005 Jun. PMID 15769804
  2. Arabidopsis nucleoside hydrolases involved in intracellular and extracellular degradation of purines. Jung B, et al. Plant J, 2011 Mar. PMID 21235647
  3. Proteomics of loosely bound cell wall proteins of Arabidopsis thaliana cell suspension cultures: a critical analysis. Borderies G, et al. Electrophoresis, 2003 Oct. PMID 14595688
  4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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NM_001343573.1
NM_121891.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables adenosine nucleosidase activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
enables inosine nucleosidase activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within adenosine catabolic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within inosine catabolic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within response to jasmonic acid IEP
Inferred from Expression Pattern
more info
 PubMed 
acts_upstream_of_or_within response to wounding IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in apoplast IDA
Inferred from Direct Assay
more info
 PubMed 
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in plant-type cell wall HDA PubMed 

General protein information

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Preferred Names
inosine-uridine preferring nucleoside hydrolase family protein
NP_197387.1
  • inosine-uridine preferring nucleoside hydrolase family protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall; CONTAINS InterPro DOMAIN/s: Inosine/uridine-preferring nucleoside hydrolase (InterPro:IPR001910); BEST Arabidopsis thaliana protein match is: Inosine-uridine preferring nucleoside hydrolase family protein (TAIR:AT5G18890.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    6290358..6295815
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_121891.4 → NP_197387.1  inosine-uridine preferring nucleoside hydrolase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_197387.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8RY23
    UniProtKB/TrEMBL
    A0A654G2H6
    Conserved Domains (1) summary
    cd02647
    Location:46 → 396
    nuc_hydro_TvIAG; nuc_hydro_ TvIAG: Nucleoside hydrolases similar to the Inosine-adenosine-guanosine-preferring nucleoside hydrolase from Trypanosoma vivax. Nucleoside hydrolases cleave the N-glycosidic bond in nucleosides generating ribose and the respective base. ...

  2. NM_001343573.1 → NP_001330199.1  inosine-uridine preferring nucleoside hydrolase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8RY23
    UniProtKB/TrEMBL
    A0A654G2H6
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8RY23.1

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