U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Rubisco methyltransferase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 831276, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Full Name
Rubisco methyltransferase family protein
Primary source
TAIR:AT5G14260
Locus tag
AT5G14260
See related
Araport:AT5G14260
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F18O22.50; F18O22_50
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 5
Exon count:
13
Sequence:
Chromosome: 5; NC_003076.8 (4600904..4604482)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ankyrin Neighboring gene Thioredoxin superfamily protein Neighboring gene Proteasome component (PCI) domain protein Neighboring gene uncharacterized protein Neighboring gene bromodomain and extraterminal domain protein 9 Neighboring gene DNA-binding storekeeper-like protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. AT_CHLORO, a comprehensive chloroplast proteome database with subplastidial localization and curated information on envelope proteins. Ferro M, et al. Mol Cell Proteomics, 2010 Jun. PMID 20061580, Free PMC Article
  2. A proteomic strategy for global analysis of plant protein complexes. Aryal UK, et al. Plant Cell, 2014 Oct. PMID 25293756, Free PMC Article
  3. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article
  4. CrY2H-seq: a massively multiplexed assay for deep-coverage interactome mapping. Wanamaker SA, et al. Nat Methods, 2017 Aug. PMID 28650476, Free PMC Article
  5. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help
NM_001343328.1
NM_121430.4
NM_180707.3
NM_203049.2

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in chloroplast HDA PubMed 
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in chloroplast stroma HDA PubMed 
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  
located_in plastid HDA PubMed 

General protein information

Go to the top of the page Help
Preferred Names
Rubisco methyltransferase family protein
NP_196930.2
  • Rubisco methyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rubisco LSMT substrate-binding (InterPro:IPR015353); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT3G07670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
NP_851038.1
  • Rubisco methyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rubisco LSMT substrate-binding (InterPro:IPR015353); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT3G07670.1); Has 733 Blast hits to 728 proteins in 142 species: Archae - 0; Bacteria - 0; Metazoa - 170; Fungi - 133; Plants - 336; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink).
NP_974778.1
  • Rubisco methyltransferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rubisco LSMT substrate-binding (InterPro:IPR015353); BEST Arabidopsis thaliana protein match is: Rubisco methyltransferase family protein (TAIR:AT3G07670.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    4600904..4604482
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_121430.4 → NP_196930.2  Rubisco methyltransferase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_196930.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8VY03, Q8VZB5
    Conserved Domains (1) summary
    pfam09273
    Location:369 → 483
    Rubis-subs-bind; Rubisco LSMT substrate-binding

  2. NM_180707.3 → NP_851038.1  Rubisco methyltransferase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_851038.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8VY03, Q8VZB5
    Conserved Domains (1) summary
    pfam09273
    Location:369 → 483
    Rubis-subs-bind; Rubisco LSMT substrate-binding

  3. NM_203049.2 → NP_974778.1  Rubisco methyltransferase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_974778.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8VY03, Q8VZB5
    Conserved Domains (1) summary
    pfam09273
    Location:369 → 483
    Rubis-subs-bind; Rubisco LSMT substrate-binding

  4. NM_001343328.1 → NP_001331285.1  Rubisco methyltransferase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BDE0, Q8VY03
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.