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PELPK2 hydroxyproline-rich glycoprotein family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 830811, updated on 18-Sep-2024

Summary

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Official Symbol
PELPK2
Official Full Name
hydroxyproline-rich glycoprotein family protein
Primary source
TAIR:AT5G09520
Locus tag
AT5G09520
See related
Araport:AT5G09520
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
Pro-Glu-Leu|Ile|Val-Pro-Lys 2; T5E8.1
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Genomic context

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See PELPK2 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_003076.8 (2958157..2958971, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Ribosomal protein S19 family protein Neighboring gene miscRNA Neighboring gene hydroxyproline-rich glycoprotein family protein Neighboring gene Chaperone DnaJ-domain superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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NM_120989.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
hydroxyproline-rich glycoprotein family protein
NP_196514.1
  • hydroxyproline-rich glycoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT5G09530.1); Has 4837 Blast hits to 2182 proteins in 495 species: Archae - 22; Bacteria - 2025; Metazoa - 1314; Fungi - 166; Plants - 730; Viruses - 63; Other Eukaryotes - 517 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    2958157..2958971 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_120989.3 → NP_196514.1  hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_196514.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LXB7
    Conserved Domains (1) summary
    NF033839
    Location:36 → 127
    PspC_subgroup_2; pneumococcal surface protein PspC, LPXTG-anchored form
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LXB7.1

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