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costars family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829505, updated on 18-Sep-2024

Summary

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Official Full Name
costars family protein
Primary source
TAIR:AT4G33640
Locus tag
AT4G33640
See related
Araport:AT4G33640
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T16L1.130; T16L1_130
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Genomic context

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Location:
chromosome: 4
Exon count:
2
Sequence:
Chromosome: 4; NC_003075.7 (16159548..16160489, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Cysteine proteinases superfamily protein Neighboring gene vacuole protein Neighboring gene UvrB/UvrC domain protein (DUF3506) Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene dynamin-related protein 3A Neighboring gene cysteine-rich TM module stress tolerance protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A proteomic strategy for global analysis of plant protein complexes. Aryal UK, et al. Plant Cell, 2014 Oct. PMID 25293756, Free PMC Article
  2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001342226.1
NM_119520.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
located_in cytosol HDA PubMed 

General protein information

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Preferred Names
costars family protein
NP_567930.1
  • unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    16159548..16160489 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_119520.4 → NP_567930.1  costars family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_567930.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O81881, Q8LBN7
    Conserved Domains (1) summary
    pfam14705
    Location:2 → 78
    Costars; Costars

  2. NM_001342226.1 → NP_001329390.1  costars family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V1V2, A0A1P8B7K5, A0A384L2X9
    Conserved Domains (1) summary
    pfam14705
    Location:68 → 144
    Costars
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8LBN7.1

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