U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829205, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Full Name
cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein
Primary source
TAIR:AT4G30820
Locus tag
AT4G30820
See related
Araport:AT4G30820
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F6I18.270; F6I18_270
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 4
Exon count:
6
Sequence:
Chromosome: 4; NC_003075.7 (15006485..15008650)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Nucleic acid-binding, OB-fold-like protein Neighboring gene serine carboxypeptidase-like 29 Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene myosin-like protein (Protein of unknown function, DUF593)

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. A tandem affinity purification-based technology platform to study the cell cycle interactome in Arabidopsis thaliana. Van Leene J, et al. Mol Cell Proteomics, 2007 Jul. PMID 17426018
  2. Targeted interactomics reveals a complex core cell cycle machinery in Arabidopsis thaliana. Van Leene J, et al. Mol Syst Biol, 2010 Aug 10. PMID 20706207, Free PMC Article
  3. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
  4. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help
NM_001085003.2
NM_001342020.1
NM_001342021.1
NM_001342022.1
NM_001342023.1
NM_001342024.1
NM_001342025.1
NM_001342026.1
NM_001342027.1
NM_001342028.1
NM_001342029.1
NM_001342030.1
NM_001342031.1
NM_001342032.1
NM_001342033.1
NM_001342034.1
NM_001342035.1
NM_001342036.1
NM_001342037.1
NM_119228.4
NM_179145.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

Go to the top of the page Help
Preferred Names
cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein
NP_001078472.1
  • cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cdk-activating kinase assembly factor (MAT1) (InterPro:IPR004575), Cdk-activating kinase assembly factor, MAT1 (InterPro:IPR015877); Has 365 Blast hits to 365 proteins in 175 species: Archae - 0; Bacteria - 0; Metazoa - 129; Fungi - 145; Plants - 58; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).
NP_567855.1
  • cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cdk-activating kinase assembly factor (MAT1) (InterPro:IPR004575), Cdk-activating kinase assembly factor, MAT1 (InterPro:IPR015877); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
NP_849476.1
  • cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cell cycle; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cdk-activating kinase assembly factor (MAT1) (InterPro:IPR004575), Cdk-activating kinase assembly factor, MAT1 (InterPro:IPR015877); Has 365 Blast hits to 365 proteins in 175 species: Archae - 0; Bacteria - 0; Metazoa - 129; Fungi - 145; Plants - 58; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    15006485..15008650
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001342038.1 → NP_001328133.1  cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V1D2, A0A1P8B3Q7, A0A384LAZ7, A0A7G2F250
    Conserved Domains (1) summary
    cl40650
    Location:1 → 35
    MAT1; CDK-activating kinase assembly factor MAT1

  2. NM_001342039.1 → NP_001328145.1  cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B3P6, A0A7G2F6Z7
    Conserved Domains (1) summary
    cl40650
    Location:9 → 66
    MAT1; CDK-activating kinase assembly factor MAT1

  3. NM_001342040.1 → NP_001328146.1  cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V1D2, A0A1P8B3Q7, A0A384LAZ7, A0A7G2F250
    Conserved Domains (1) summary
    cl40650
    Location:1 → 35
    MAT1; CDK-activating kinase assembly factor MAT1

  4. NM_001342042.1 → NP_001328135.1  cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B3P6, A0A7G2F6Z7
    Conserved Domains (1) summary
    cl40650
    Location:9 → 66
    MAT1; CDK-activating kinase assembly factor MAT1

  5. NM_001342041.1 → NP_001328134.1  cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V1D2, A0A1P8B3Q7, A0A384LAZ7, A0A7G2F250
    Conserved Domains (1) summary
    cl40650
    Location:1 → 35
    MAT1; CDK-activating kinase assembly factor MAT1

  6. NM_001342043.1 → NP_001328136.1  cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B3P6, A0A7G2F6Z7
    Conserved Domains (1) summary
    cl40650
    Location:9 → 66
    MAT1; CDK-activating kinase assembly factor MAT1

  7. NM_179145.3 → NP_849476.1  cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_849476.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q84K40, Q8LES8
    Conserved Domains (1) summary
    cl40650
    Location:12 → 81
    MAT1; CDK-activating kinase assembly factor MAT1

  8. NM_119228.4 → NP_567855.1  cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_567855.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q84K40, Q8LES8
    Conserved Domains (1) summary
    cl40650
    Location:12 → 81
    MAT1; CDK-activating kinase assembly factor MAT1

  9. NM_001342021.1 → NP_001328140.1  cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B3P6, A0A7G2F6Z7
    Conserved Domains (1) summary
    cl40650
    Location:9 → 66
    MAT1; CDK-activating kinase assembly factor MAT1

  10. NM_001342029.1 → NP_001328132.1  cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B3P6, A0A7G2F6Z7
    Conserved Domains (1) summary
    cl40650
    Location:9 → 66
    MAT1; CDK-activating kinase assembly factor MAT1

  11. NM_001342027.1 → NP_001328131.1  cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q84K40, Q8LES8
    Conserved Domains (1) summary
    cl40650
    Location:12 → 81
    MAT1; CDK-activating kinase assembly factor MAT1

  12. NM_001342031.1 → NP_001328153.1  cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B3T8, A0A654FUE1

  13. NM_001342025.1 → NP_001328143.1  cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q84K40, Q8LES8
    Conserved Domains (1) summary
    cl40650
    Location:12 → 81
    MAT1; CDK-activating kinase assembly factor MAT1

  14. NM_001342032.1 → NP_001328152.1  cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V1D2, A0A1P8B3Q7, A0A384LAZ7, A0A7G2F250
    Conserved Domains (1) summary
    cl40650
    Location:1 → 35
    MAT1; CDK-activating kinase assembly factor MAT1

  15. NM_001342020.1 → NP_001328139.1  cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B3P5

  16. NM_001342022.1 → NP_001328137.1  cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B3P5

  17. NM_001342026.1 → NP_001328141.1  cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B3T8, A0A654FUE1

  18. NM_001342033.1 → NP_001328151.1  cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V1D2, A0A1P8B3Q7, A0A384LAZ7, A0A7G2F250
    Conserved Domains (1) summary
    cl40650
    Location:1 → 35
    MAT1; CDK-activating kinase assembly factor MAT1

  19. NM_001085003.2 → NP_001078472.1  cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001078472.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q84K40, Q8LES8
    Conserved Domains (1) summary
    cl40650
    Location:12 → 81
    MAT1; CDK-activating kinase assembly factor MAT1

  20. NM_001342028.1 → NP_001328144.1  cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B3P5

  21. NM_001342023.1 → NP_001328138.1  cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B3P5

  22. NM_001342024.1 → NP_001328142.1  cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V1D2, A0A1P8B3Q7, A0A384LAZ7, A0A7G2F250
    Conserved Domains (1) summary
    cl40650
    Location:1 → 35
    MAT1; CDK-activating kinase assembly factor MAT1

  23. NM_001342030.1 → NP_001328154.1  cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q84K40, Q8LES8
    Conserved Domains (1) summary
    cl40650
    Location:12 → 81
    MAT1; CDK-activating kinase assembly factor MAT1

  24. NM_001342034.1 → NP_001328150.1  cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V1D2, A0A1P8B3Q7, A0A384LAZ7, A0A7G2F250
    Conserved Domains (1) summary
    cl40650
    Location:1 → 35
    MAT1; CDK-activating kinase assembly factor MAT1

  25. NM_001342035.1 → NP_001328149.1  cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B3P6, A0A7G2F6Z7
    Conserved Domains (1) summary
    cl40650
    Location:9 → 66
    MAT1; CDK-activating kinase assembly factor MAT1

  26. NM_001342036.1 → NP_001328148.1  cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V1D2, A0A1P8B3Q7, A0A384LAZ7, A0A7G2F250
    Conserved Domains (1) summary
    cl40650
    Location:1 → 35
    MAT1; CDK-activating kinase assembly factor MAT1

  27. NM_001342037.1 → NP_001328147.1  cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q84K40, Q8LES8
    Conserved Domains (1) summary
    cl40650
    Location:12 → 81
    MAT1; CDK-activating kinase assembly factor MAT1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.