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Aminotransferase-like, plant mobile domain family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 827290, updated on 18-Sep-2024

Summary

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Official Full Name
Aminotransferase-like, plant mobile domain family protein
Primary source
TAIR:AT4G16050
Locus tag
AT4G16050
See related
Araport:AT4G16050
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
DL4065W; FCAALL.267
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Genomic context

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Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_003075.7 (9092226..9094357)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene TRAF-like superfamily protein Neighboring gene uncharacterized protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Plastid gene expression and plant development require a plastidic protein of the mitochondrial transcription termination factor family. Babiychuk E, et al. Proc Natl Acad Sci U S A, 2011 Apr 19. PMID 21464319, Free PMC Article
  2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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NM_117698.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in meristem maintenance IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chloroplast IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Aminotransferase-like, plant mobile domain family protein
NP_193340.2
  • Aminotransferase-like, plant mobile domain family protein; CONTAINS InterPro DOMAIN/s: Aminotransferase-like, plant mobile domain (InterPro:IPR019557); BEST Arabidopsis thaliana protein match is: Aminotransferase-like, plant mobile domain family protein (TAIR:AT1G51538.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    9092226..9094357
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_117698.2 → NP_193340.2  Aminotransferase-like, plant mobile domain family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_193340.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9XSY3, Q8RXC3
    Conserved Domains (2) summary
    pfam10536
    Location:99 → 442
    PMD; Plant mobile domain
    cl19417
    Location:500 → 544
    FYDLN_acid; Protein of unknown function (FYDLN_acid)
Nucleotide Protein
Heading Accession and Version

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