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F-box/RNI superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 825084, updated on 18-Sep-2024

Summary

Official Full Name
F-box/RNI superfamily protein
Primary source
TAIR:AT3G59150
Locus tag
AT3G59150
See related
Araport:AT3G59150
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

Location:
chromosome: 3
Exon count:
3
Sequence:
Chromosome: 3; NC_003074.8 (21872831..21874422)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Cysteine/Histidine-rich C1 domain family protein Neighboring gene multidrug resistance-associated protein 14 Neighboring gene F-box/RNI-like superfamily protein Neighboring gene F-box/RNI-like superfamily protein

Interactions

General gene information

NM_115777.5

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in nucleus  

General protein information

Preferred Names
F-box/RNI superfamily protein
NP_191474.3
  • F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), FBD-like (InterPro:IPR006566), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT2G42730.2); Has 1506 Blast hits to 1463 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 1502; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    21872831..21874422
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_115777.5 → NP_191474.3  F-box/RNI superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4J870, Q9LX56, Q9LYS1
    UniProtKB/TrEMBL
    A0A5S9XM50, A0A654FJ51
    Conserved Domains (3) summary
    smart00579
    Location:400 → 471
    FBD; domain in FBox and BRCT domain containing plant proteins
    sd00032
    Location:147 → 169
    LRR_2; leucine-rich repeat [structural motif]
    pfam00646
    Location:15 → 60
    F-box; F-box domain
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