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MYB45 myb domain protein 45 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 824053, updated on 18-Sep-2024

Summary

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Official Symbol
MYB45
Official Full Name
myb domain protein 45
Primary source
TAIR:AT3G48920
Locus tag
AT3G48920
See related
Araport:AT3G48920
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AtMYB45; myb domain protein 45
Summary
Member of the R2R3 factor gene family.
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Genomic context

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See MYB45 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
3
Sequence:
Chromosome: 3; NC_003074.8 (18139172..18140772)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene membrane-associated progesterone binding protein 3 Neighboring gene single-stranded DNA endonuclease family protein Neighboring gene Nucleic acid-binding, OB-fold-like protein Neighboring gene Remorin family protein Neighboring gene Pectin lyase-like superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Riechmann JL, et al. Science, 2000 Dec 15. PMID 11118137
  2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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NM_114751.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables DNA-binding transcription factor activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
myb domain protein 45
NP_190461.1
  • myb domain protein 45 (MYB45); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 18 (TAIR:AT4G25560.1); Has 8926 Blast hits to 8195 proteins in 505 species: Archae - 0; Bacteria - 0; Metazoa - 809; Fungi - 469; Plants - 5801; Viruses - 3; Other Eukaryotes - 1844 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    18139172..18140772
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_114751.2 → NP_190461.1  myb domain protein 45 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_190461.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9XJ31, A0A654FE50, Q9SMT1
    Conserved Domains (1) summary
    PLN03091
    Location:15 → 126
    PLN03091; hypothetical protein; Provisional
Nucleotide Protein
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