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AGP11 arabinogalactan protein 11 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 821093, updated on 18-Sep-2024

Summary

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Official Symbol
AGP11
Official Full Name
arabinogalactan protein 11
Primary source
TAIR:AT3G01700
Locus tag
AT3G01700
See related
Araport:AT3G01700
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
arabinogalactan protein 11; ARABINOGALACTAN PROTEIN 11; ATAGP11; F4P13.24; F4P13_24
Summary
Encodes an arabinogalactan protein that is expressed in pollen, pollen sac and pollen tube. Loss of AGP11 function results in decreased fertility due to defects in pollen tube growth.
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Genomic context

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See AGP11 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Sequence:
Chromosome: 3; NC_003074.8 (258879..259631)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene sieve element occlusion amino-terminus protein Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene tRNA-Pro Neighboring gene TPX2 (targeting protein for Xklp2) protein family Neighboring gene peptidyl serine alpha-galactosyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Expression-based and co-localization detection of arabinogalactan protein 6 and arabinogalactan protein 11 interactors in Arabidopsis pollen and pollen tubes. Costa M, et al. BMC Plant Biol, 2013 Jan 8. PMID 23297674, Free PMC Article
  2. Early germination of Arabidopsis pollen in a double null mutant for the arabinogalactan protein genes AGP6 and AGP11. Coimbra S, et al. Sex Plant Reprod, 2010 Sep. PMID 20162305
  3. Pollen grain development is compromised in Arabidopsis agp6 agp11 null mutants. Coimbra S, et al. J Exp Bot, 2009. PMID 19433479, Free PMC Article
  4. Arabinogalactan proteins 6 and 11 are required for stamen and pollen function in Arabidopsis. Levitin B, et al. Plant J, 2008 Nov. PMID 18644001
  5. Identification of glycosylphosphatidylinositol-anchored proteins in Arabidopsis. A proteomic and genomic analysis. Borner GH, et al. Plant Physiol, 2003 Jun. PMID 12805588, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The data presented suggest the involvement of AGP6 and AGP11 in multiple signaling pathways, in particular those involved in developmental processes such as endocytosis-mediated plasma membrane remodeling during Arabidopsis pollen development.
    Title: Expression-based and co-localization detection of arabinogalactan protein 6 and arabinogalactan protein 11 interactors in Arabidopsis pollen and pollen tubes.
  2. Pollen of agp6 agp11 double null mutant displayed reduced germination and elongation.
    Title: Early germination of Arabidopsis pollen in a double null mutant for the arabinogalactan protein genes AGP6 and AGP11.
  3. Agp6 and Agp11 have overlapping and important functions in gametophytic pollen grain development.
    Title: Pollen grain development is compromised in Arabidopsis agp6 agp11 null mutants.
  4. Loss of function in AGP6 and AGP11 leads to reduced fertility, inhibition of pollen tube growth and inhibition of pollen release from stamens.
    Title: Arabinogalactan proteins 6 and 11 are required for stamen and pollen function in Arabidopsis.
Submit: New GeneRIF Correction

General gene information

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NM_111036.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within pollen tube growth IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane TAS
Traceable Author Statement
more info
 PubMed 
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
arabinogalactan protein 11
NP_566146.1
  • arabinogalactan protein 11 (AGP11); BEST Arabidopsis thaliana protein match is: arabinogalactan protein 6 (TAIR:AT5G14380.1); Has 18682 Blast hits to 7914 proteins in 897 species: Archae - 47; Bacteria - 4443; Metazoa - 2565; Fungi - 1546; Plants - 1733; Viruses - 648; Other Eukaryotes - 7700 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    258879..259631
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_111036.3 → NP_566146.1  arabinogalactan protein 11 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566146.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9FVE0, Q9S7N4
    UniProtKB/TrEMBL
    A0A178VG39, A0A5S9X8S5
    Conserved Domains (1) summary
    PRK12270
    Location:19 → 107
    kgd; multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FVE0.2

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