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SRF4 STRUBBELIG-receptor family 4 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 820494, updated on 18-Sep-2024

Summary

Official Symbol
SRF4
Official Full Name
STRUBBELIG-receptor family 4
Primary source
TAIR:AT3G13065
Locus tag
AT3G13065
See related
Araport:AT3G13065
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MGH6.19; STRUBBELIG-receptor family 4
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Genomic context

See SRF4 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
15
Sequence:
Chromosome: 3; NC_003074.8 (4187371..4191298)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene evolutionarily conserved C-terminal region 5 Neighboring gene ncRNA Neighboring gene Polyketide cyclase/dehydrase and lipid transport superfamily protein Neighboring gene CBS domain-containing protein / transporter associated domain-containing protein Neighboring gene uncharacterized protein Neighboring gene multidrug resistance-associated protein 3

Interactions

General gene information

NM_112145.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables kinase activity  
enables protein kinase activity  
Process Evidence Code Pubs
acts_upstream_of_or_within phosphorylation  
Component Evidence Code Pubs
located_in extracellular region  

General protein information

Preferred Names
STRUBBELIG-receptor family 4
NP_566444.4
  • STRUBBELIG-receptor family 4 (SRF4); FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: STRUBBELIG-receptor family 5 (TAIR:AT1G78980.1); Has 161934 Blast hits to 117397 proteins in 3485 species: Archae - 127; Bacteria - 13410; Metazoa - 46563; Fungi - 8828; Plants - 74801; Viruses - 375; Other Eukaryotes - 17830 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    4187371..4191298
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_112145.4 → NP_566444.4  STRUBBELIG-receptor family 4 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_566444.4

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q6R2K2, Q9LK66
    UniProtKB/TrEMBL
    A0A7G2EM29
    Conserved Domains (6) summary
    cd00116
    Location:79 → 235
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00033
    Location:97 → 118
    LRR_RI; leucine-rich repeat [structural motif]
    pfam00069
    Location:415 → 674
    Pkinase; Protein kinase domain
    pfam08263
    Location:28 → 68
    LRRNT_2; Leucine rich repeat N-terminal domain
    pfam13855
    Location:143 → 201
    LRR_8; Leucine rich repeat
    cl21453
    Location:421 → 686
    PKc_like; Protein Kinases, catalytic domain
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