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PGSIP7 Nucleotide-diphospho-sugar transferases superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 818140, updated on 18-Sep-2024

Summary

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Official Symbol
PGSIP7
Official Full Name
Nucleotide-diphospho-sugar transferases superfamily protein
Primary source
TAIR:AT2G35710
Locus tag
AT2G35710
See related
Araport:AT2G35710
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
plant glycogenin-like starch initiation protein 7; T20F21.27
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Genomic context

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See PGSIP7 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
3
Sequence:
Chromosome: 2; NC_003071.7 (15010707..15014284, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene acyl-CoA oxidase 5 Neighboring gene ERF family protein 38 Neighboring gene DNAJ heat shock N-terminal domain-containing protein Neighboring gene Heavy metal transport/detoxification superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001336571.1
NM_129126.5
NM_201878.3
NM_201879.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables glycosyltransferase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Nucleotide-diphospho-sugar transferases superfamily protein
NP_565817.2
  • Nucleotide-diphospho-sugar transferases superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process, biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT4G16600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
NP_973607.1
  • Nucleotide-diphospho-sugar transferases superfamily protein; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT4G16600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
NP_973608.1
  • Nucleotide-diphospho-sugar transferases superfamily protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process, biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT4G16600.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    15010707..15014284 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_129126.5 → NP_565817.2  Nucleotide-diphospho-sugar transferases superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565817.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8VZP6, Q9ZQP4
    UniProtKB/TrEMBL
    A0A178VNC9, A0A5S9X489, W8PVK8
    Conserved Domains (1) summary
    cd02537
    Location:63 → 315
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen

  2. NM_001336571.1 → NP_001323450.1  Nucleotide-diphospho-sugar transferases superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AX70

  3. NM_201878.3 → NP_973607.1  Nucleotide-diphospho-sugar transferases superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_973607.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VND1
    Conserved Domains (1) summary
    cl11394
    Location:9 → 207
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  4. NM_201879.2 → NP_973608.1  Nucleotide-diphospho-sugar transferases superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_973608.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VQ31, Q8S8K3
    Conserved Domains (1) summary
    cl11394
    Location:63 → 115
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8VZP6.1

Gene LinkOut

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