U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ARPC1A actin-related protein C1A [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817641, updated on 18-Sep-2024

Summary

Official Symbol
ARPC1A
Official Full Name
actin-related protein C1A
Primary source
TAIR:AT2G30910
Locus tag
AT2G30910
See related
Araport:AT2G30910
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ACTIN-RELATED PROTEIN C1; actin-related protein C1A; ARPC1; F7F1.12; F7F1_12
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See ARPC1A in Genome Data Viewer
Location:
chromosome: 2
Exon count:
16
Sequence:
Chromosome: 2; NC_003071.7 (13152789..13157107)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene glutathione S-transferase PHI 10 Neighboring gene Pleckstrin homology (PH) domain-containing protein Neighboring gene Cytochrome b561/ferric reductase transmembrane protein family Neighboring gene TRICHOME BIREFRINGENCE-LIKE 43 Neighboring gene coenzyme Q 3 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

NM_001202716.1
NM_128643.4
NM_201841.1

General protein information

Preferred Names
actin-related protein C1A
NP_001189645.1
  • actin-related protein C1A (ARPC1A); FUNCTIONS IN: actin binding, nucleotide binding; INVOLVED IN: actin filament organization; LOCATED IN: Arp2/3 protein complex, nucleus, cytoplasm; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), Actin-related protein 2/3 complex, subunit 1 (InterPro:IPR017383), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: actin-related protein C1B (TAIR:AT2G31300.1).
NP_180648.1
  • actin-related protein C1A (ARPC1A); FUNCTIONS IN: actin binding, nucleotide binding; INVOLVED IN: actin filament organization; LOCATED IN: Arp2/3 protein complex, nucleus, cytoplasm; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), Actin-related protein 2/3 complex, subunit 1 (InterPro:IPR017383), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: actin-related protein C1B (TAIR:AT2G31300.1); Has 4172 Blast hits to 3036 proteins in 305 species: Archae - 4; Bacteria - 871; Metazoa - 1539; Fungi - 831; Plants - 451; Viruses - 0; Other Eukaryotes - 476 (source: NCBI BLink).
NP_973570.1
  • actin-related protein C1A (ARPC1A); FUNCTIONS IN: actin binding, nucleotide binding; INVOLVED IN: actin filament organization; LOCATED IN: Arp2/3 protein complex, nucleus, cytoplasm; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), Actin-related protein 2/3 complex, subunit 1 (InterPro:IPR017383), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: actin-related protein C1B (TAIR:AT2G31300.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    13152789..13157107
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001202716.1NP_001189645.1  actin-related protein C1A [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001189645.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O80856
    UniProtKB/TrEMBL
    A0A5S9X2S8
    Conserved Domains (3) summary
    COG2319
    Location:8371
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:1353
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:48282
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  2. NM_128643.4NP_180648.1  actin-related protein C1A [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_180648.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O80856
    UniProtKB/TrEMBL
    A0A5S9X2S8
    Conserved Domains (3) summary
    COG2319
    Location:8371
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:1353
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:48282
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  3. NM_201841.1NP_973570.1  actin-related protein C1A [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_973570.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9X2S8, F4IPT5
    Conserved Domains (3) summary
    COG2319
    Location:8371
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:1353
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:48282
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...