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Mannose-binding lectin superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817139, updated on 18-Sep-2024

Summary

Official Full Name
Mannose-binding lectin superfamily protein
Primary source
TAIR:AT2G25980
Locus tag
AT2G25980
See related
Araport:AT2G25980
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T19L18.21; T19L18_21
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Genomic context

Location:
chromosome: 2
Exon count:
5
Sequence:
Chromosome: 2; NC_003071.7 (11077438..11079968, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene KH domain-containing protein Neighboring gene pseudo Neighboring gene uncharacterized protein Neighboring gene zinc finger (C3HC4-type RING finger) family protein

Bibliography

Related articles in PubMed

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

NM_128157.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 
located_in cytoplasm ISM
Inferred from Sequence Model
more info
 
located_in plasmodesma HDA PubMed 

General protein information

Preferred Names
Mannose-binding lectin superfamily protein
NP_180168.1
  • Mannose-binding lectin superfamily protein; CONTAINS InterPro DOMAIN/s: Mannose-binding lectin (InterPro:IPR001229); BEST Arabidopsis thaliana protein match is: jacalin lectin family protein (TAIR:AT1G33790.1); Has 1842 Blast hits to 680 proteins in 37 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 2; Plants - 1834; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    11077438..11079968 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001336032.1NP_001325173.1  Mannose-binding lectin superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B2D4
  2. NM_128157.4NP_180168.1  Mannose-binding lectin superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_180168.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O80998
    UniProtKB/TrEMBL
    A0A178VQA5, A0A5S9X1R3, A0A654F177
    Conserved Domains (1) summary
    pfam01419
    Location:314446
    Jacalin; Jacalin-like lectin domain