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OVA4 Nucleotidylyl transferase superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 817126, updated on 18-Sep-2024

Summary

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Official Symbol
OVA4
Official Full Name
Nucleotidylyl transferase superfamily protein
Primary source
TAIR:AT2G25840
Locus tag
AT2G25840
See related
Araport:AT2G25840
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F17H15.13; F17H15_13; ovule abortion 4
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Genomic context

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See OVA4 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
13
Sequence:
Chromosome: 2; NC_003071.7 (11021692..11025451)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene tonoplast intrinsic protein 4;1 Neighboring gene Integrase-type DNA-binding superfamily protein Neighboring gene YebC-like protein Neighboring gene poly(A) polymerase 2 Neighboring gene haloacid dehalogenase-like hydrolase family protein Neighboring gene ataurora2 Neighboring gene Oleosin family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Dual targeting is the rule for organellar aminoacyl-tRNA synthetases in Arabidopsis thaliana. Duchêne AM, et al. Proc Natl Acad Sci U S A, 2005 Nov 8. PMID 16251277, Free PMC Article
  2. Requirement of aminoacyl-tRNA synthetases for gametogenesis and embryo development in Arabidopsis. Berg M, et al. Plant J, 2005 Dec. PMID 16297076
  3. Redox Conformation-Specific Protein-Protein Interactions of the 2-Cysteine Peroxiredoxin in Arabidopsis. Liebthal M, et al. Antioxidants (Basel), 2020 Jun 11. PMID 32545358, Free PMC Article
  4. AT_CHLORO, a comprehensive chloroplast proteome database with subplastidial localization and curated information on envelope proteins. Ferro M, et al. Mol Cell Proteomics, 2010 Jun. PMID 20061580, Free PMC Article
  5. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001336021.1
NM_179739.4
NM_201804.3
NM_201805.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables tryptophan-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within plant ovule development IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in tryptophanyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chloroplast HDA PubMed 
located_in chloroplast IDA
Inferred from Direct Assay
more info
 PubMed 
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in chloroplast stroma HDA PubMed 
located_in mitochondrion IDA
Inferred from Direct Assay
more info
 PubMed 
located_in vacuole HDA PubMed 

General protein information

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Preferred Names
Nucleotidylyl transferase superfamily protein
NP_850070.1
  • ovule abortion 4 (OVA4); FUNCTIONS IN: nucleotide binding, aminoacyl-tRNA ligase activity, tryptophan-tRNA ligase activity, ATP binding; INVOLVED IN: N-terminal protein myristoylation, tRNA aminoacylation for protein translation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tryptophanyl-tRNA synthetase, class Ib (InterPro:IPR002306), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); Has 9074 Blast hits to 9053 proteins in 2715 species: Archae - 101; Bacteria - 5434; Metazoa - 147; Fungi - 137; Plants - 44; Viruses - 0; Other Eukaryotes - 3211 (source: NCBI BLink).
NP_973533.1
  • ovule abortion 4 (OVA4); FUNCTIONS IN: tryptophan-tRNA ligase activity, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tryptophanyl-tRNA synthetase, class Ib (InterPro:IPR002306), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
NP_973534.1
  • ovule abortion 4 (OVA4); FUNCTIONS IN: aminoacyl-tRNA ligase activity, tryptophan-tRNA ligase activity, nucleotide binding, ATP binding; INVOLVED IN: tRNA aminoacylation for protein translation, ovule development; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Tryptophanyl-tRNA synthetase, class Ib (InterPro:IPR002306), Aminoacyl-tRNA synthetase, class Ib (InterPro:IPR002305); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    11021692..11025451
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_179739.4 → NP_850070.1  Nucleotidylyl transferase superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_850070.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O82313, Q8RXE9
    UniProtKB/TrEMBL
    A0A654EXS2
    Conserved Domains (1) summary
    PLN02886
    Location:19 → 407
    PLN02886; aminoacyl-tRNA ligase

  2. NM_001336021.1 → NP_001323723.1  Nucleotidylyl transferase superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AY21, A0A654EXS2

  3. NM_201804.3 → NP_973533.1  Nucleotidylyl transferase superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_973533.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VQC6, A0A654EXS2, F4ISP4
    Conserved Domains (2) summary
    PLN02886
    Location:19 → 411
    PLN02886; aminoacyl-tRNA ligase
    PRK00927
    Location:64 → 409
    PRK00927; tryptophanyl-tRNA synthetase; Reviewed

  4. NM_201805.1 → NP_973534.1  Nucleotidylyl transferase superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_973534.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654EXS2, F4ISP6
    Conserved Domains (2) summary
    PLN02886
    Location:19 → 395
    PLN02886; aminoacyl-tRNA ligase
    PRK00927
    Location:64 → 393
    PRK00927; tryptophanyl-tRNA synthetase; Reviewed
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8RXE9.1

Gene LinkOut

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