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PP2-B6 phloem protein 2-B6 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 814762, updated on 18-Sep-2024

Summary

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Official Symbol
PP2-B6
Official Full Name
phloem protein 2-B6
Primary source
TAIR:AT2G02310
Locus tag
AT2G02310
See related
Araport:AT2G02310
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AtPP2-B6; phloem protein 2-B6; T16F16.10; T16F16_10
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Genomic context

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See PP2-B6 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
3
Sequence:
Chromosome: 2; NC_003071.7 (608586..610283, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Haloacid dehalogenase-like hydrolase (HAD) superfamily protein Neighboring gene phloem protein 2-B5 Neighboring gene phloem protein 2-B7 Neighboring gene miscRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Diversity of the superfamily of phloem lectins (phloem protein 2) in angiosperms. Dinant S, et al. Plant Physiol, 2003 Jan. PMID 12529520, Free PMC Article
  2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables carbohydrate binding ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
phloem protein 2-B6
NP_178337.1
  • phloem protein 2-B6 (PP2-B6); FUNCTIONS IN: carbohydrate binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf whorl, sperm cell, root, leaf; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-B2 (TAIR:AT2G02250.1); Has 502 Blast hits to 484 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 498; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    608586..610283 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_126289.2 → NP_178337.1  phloem protein 2-B6 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_178337.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9ZVR0
    UniProtKB/TrEMBL
    A0A5S9WWK8, A0A654ERB5
    Conserved Domains (2) summary
    pfam00646
    Location:43 → 87
    F-box; F-box domain
    pfam14299
    Location:135 → 303
    PP2; Phloem protein 2
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9ZVR0.1

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