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Timm22 translocase of inner mitochondrial membrane 22 [ Rattus norvegicus (Norway rat) ]

Gene ID: 79463, updated on 4-Jan-2025

Summary

Official Symbol
Timm22provided by RGD
Official Full Name
translocase of inner mitochondrial membrane 22provided by RGD
Primary source
RGD:68406
See related
EnsemblRapid:ENSRNOG00000007988 AllianceGenome:RGD:68406
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to enable mitochondrion targeting sequence binding activity and protein transmembrane transporter activity. Predicted to be involved in protein insertion into mitochondrial inner membrane. Predicted to be located in mitochondrial inner membrane. Predicted to be part of TIM22 mitochondrial import inner membrane insertion complex. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 43. Orthologous to human TIMM22 (translocase of inner mitochondrial membrane 22). [provided by Alliance of Genome Resources, Jan 2025]
Expression
Biased expression in Heart (RPKM 118.0), Kidney (RPKM 117.4) and 9 other tissues See more
Orthologs
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Genomic context

See Timm22 in Genome Data Viewer
Location:
10q24
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (61751686..61759444)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (61253459..61261217)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (64556064..64563822)

Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene mitochondrial rRNA methyltransferase 3 Neighboring gene nucleoredoxin Neighboring gene uncharacterized LOC120095143 Neighboring gene ABR activator of RhoGEF and GTPase Neighboring gene transfer RNA alanine (anticodon UGC) 11 Neighboring gene uncharacterized LOC120095144

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General gene information

Markers

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables mitochondrion targeting sequence binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables protein transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables protein transporter activity ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
involved_in protein insertion into mitochondrial inner membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in protein insertion into mitochondrial inner membrane ISO
Inferred from Sequence Orthology
more info
 
involved_in protein insertion into mitochondrial inner membrane ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in protein transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of TIM22 mitochondrial import inner membrane insertion complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of TIM22 mitochondrial import inner membrane insertion complex ISO
Inferred from Sequence Orthology
more info
 
part_of TIM22 mitochondrial import inner membrane insertion complex ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in mitochondrial inner membrane ISO
Inferred from Sequence Orthology
more info
 
located_in mitochondrion ISO
Inferred from Sequence Orthology
more info
PubMed 

General protein information

Preferred Names
mitochondrial import inner membrane translocase subunit Tim22
Names
translocase of inner mitochondrial membrane 22 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_032618.1NP_116007.1  mitochondrial import inner membrane translocase subunit Tim22

    See identical proteins and their annotated locations for NP_116007.1

    Status: VALIDATED

    Source sequence(s)
    FM107575, JAXUCZ010000010
    UniProtKB/Swiss-Prot
    Q9JKW1
    UniProtKB/TrEMBL
    A6HGV6
    Related
    ENSRNOP00000010779.5, ENSRNOT00000010778.9
    Conserved Domains (1) summary
    pfam02466
    Location:67184
    Tim17; Tim17/Tim22/Tim23/Pmp24 family

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086028.1 Reference GRCr8

    Range
    61751686..61759444
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)